<br>HI <br>THe command =><br>g_sas_mpi -f 6LYZ-MD566500.xtc -s 6LYZ-MD566500.tpr -o solvent-accessible-surface.xvg -oa atomic-sas.xvg -or residue-sas.xvg<br><br><br><br>In the solvent-accessible-surface.xvg =><br>@ s0 legend "Hydrophobic"<br>
@ s1 legend "Hydrophilic"<br>@ s2 legend "Total"<br>@ s3 legend "D Gsolv"<br><br>What does "Hydrophobic" mean here?<br>What does "Hydrophilic" mean here?<br>
Does "Total = Hydrophobic+Hydrophilic" ?<br>What does "D Gsolv" mean here?<br>
How can Gromacs define "Hydrophobic atoms" and "Hydrophilic atoms" ?<br><br><br><br>What does the Area unit mean ? => "Area (nm\S2\N)"<br><br><br>Thank you<br>Lin<br><br>