<div><br></div><div>Hi</div><div>With the following two commands,  </div><span class="Apple-style-span" style="font-family: Times; font-size: medium; "><pre>do_dssp -f 6LYZ-MD.xtc -s 6LYZ-MD.tpr -o secondary-structure.xpm -sc secondary-structure.xvg</pre>
</span><div><span class="Apple-style-span" style="font-family: Times; font-size: medium; "><pre>xpm2ps -f secondary-structure.xpm -o secondary-structure.eps</pre></span></div><div><br></div><div>With GIMP, i can see the secondary structure plot. <span class="Apple-style-span" style="font-family: arial, sans-serif; font-size: 13px; border-collapse: collapse; ">The legend indicates the color of different second structure is shown under the secondary-structure plot.</span></div>
<div><font class="Apple-style-span" face="arial, sans-serif"><span class="Apple-style-span" style="border-collapse: collapse;"><br></span></font></div><div><font class="Apple-style-span" face="arial, sans-serif"><span class="Apple-style-span" style="border-collapse: collapse;"><br>
</span></font></div><div><font class="Apple-style-span" face="arial, sans-serif"><span class="Apple-style-span" style="border-collapse: collapse;"><br></span></font></div><div><span class="Apple-style-span" style="font-family: arial, sans-serif; font-size: 13px; border-collapse: collapse; ">One legend is half-shown. The picture of legend is cut.</span></div>
<div><span class="Apple-style-span" style="font-family: arial, sans-serif; font-size: 13px; border-collapse: collapse; ">How can I get that legend full-shown.</span></div><div><br></div><div>Thank you</div><div>Lin</div><div>
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