<div>Dear Justin</div>
<div>thanks for your attention</div>
<div> </div>
<div>I want to use simulated annealing to obtain global minimum for protein-dna structure. I will do first heating and then slowly cooling.</div>
<div> </div>
<div>is my mdp file true, now?</div>
<div> <br>T-couple = brendsen<br> <br>ref-t = 300<br><br>annealing: single</div>
<div><br>annealing_npoints: 5<br> <br>annealing_time: 0 3 6 9 12 <br> <br>annealing_temp: 150 650 600 550 500 450 400 350 300<br><br>Best regards.<br><br></div>