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Hi<br>No, the original <span class="ecxApple-style-span" style="border-collapse: separate; font-family: Helvetica; font-size: medium; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;">gromacs-4.0.7 installation was not a clone from the repository.&nbsp; <br>So I uninstall that, and install the clone after getting the patches?<br>Thanks<br>Vijaya<br><br></span><br><hr id="stopSpelling">From: ckutzne@gwdg.de<br>Subject: Re: [gmx-users] make_edi, g_covar -nofit<br>Date: Wed, 5 May 2010 09:49:22 +0200<br>To: gmx-users@gromacs.org<br><br>

<div><div>On May 4, 2010, at 10:56 PM, vijaya subramanian wrote:</div><br class="ecxApple-interchange-newline"><blockquote><span class="ecxApple-style-span" style="border-collapse: separate; font-family: Helvetica; font-size: medium; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;"><div class="ecxhmmessage" style="font-size: 10pt; font-family: Verdana;">Hi Carsten<span class="ecxApple-converted-space">&nbsp;</span><br>A couple of quick questions:<br>I already have gromacs-4.0.7 downloaded from the gromacs website.&nbsp; I found that I couldn't<span class="ecxApple-converted-space">&nbsp;</span><br>use git checkout --track -b release-4-0-patches origin/release-4-0-patches to get the patches.<br>fatal: Not a git repository<br>Do I have to uninstall gromacs-4.0.7 and re-install gromacs obtained from the git site as below,<br>then install gromacs again?<br><br></div></span></blockquote>Hi,</div><div><br></div><div>if the git clone command worked, then the git checkout --track should also work.</div><div>Maybe you forgot to change into the gromacs directory that was produced by the</div><div>first command? You have to do the checkout --track in the directory where a</div><div>.git subdir is present.</div><div><br><blockquote><span class="ecxApple-style-span" style="border-collapse: separate; font-family: Helvetica; font-size: medium; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;"><div class="ecxhmmessage" style="font-size: 10pt; font-family: Verdana;">git clone<span class="ecxApple-converted-space">&nbsp;</span><a>git://git.gromacs.org/gromacs.git</a><br></div></span></blockquote>cd gromacs<br><blockquote><span class="ecxApple-style-span" style="border-collapse: separate; font-family: Helvetica; font-size: medium; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;"><div class="ecxhmmessage" style="font-size: 10pt; font-family: Verdana;">git checkout --track -b release-4-0-patches origin/release-4-0-patches<br></div></span></blockquote></div><div><br></div>Carsten<div><br><div>
<span class="ecxApple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;"><span class="ecxApple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 14px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;"><div style=""><div><br class="ecxApple-interchange-newline">--</div><div>Dr.&nbsp;Carsten Kutzner</div><div>Max Planck Institute for Biophysical Chemistry</div><div>Theoretical and Computational Biophysics</div><div>Am Fassberg 11,&nbsp;37077 Goettingen, Germany</div><div>Tel. +49-551-2012313, Fax: +49-551-2012302</div><div><a href="http://www.mpibpc.mpg.de/home/grubmueller/ihp/ckutzne">http://www.mpibpc.mpg.de/home/grubmueller/ihp/ckutzne</a></div><div><br></div></div><br class="ecxApple-interchange-newline"></span><br class="ecxApple-interchange-newline"></span>
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