but it over writes on the previous status.<br><br><div class="gmail_quote">On Wed, May 19, 2010 at 2:12 PM, Thomas Schlesier <span dir="ltr"><<a href="mailto:schlesi@uni-mainz.de">schlesi@uni-mainz.de</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">Use genion multiple times.<br>
If you want to insert Na+ and K+, then first use genion with one and then with the other ion.<br>
<br>
Greetings<br>
Thomas<br>
<br>
<br>
<br>
Message: 5<br>
Date: Wed, 19 May 2010 11:37:09 +0430<div class="im"><br>
From: tahereh tekieh <<a href="mailto:golesang80@gmail.com" target="_blank">golesang80@gmail.com</a>><br></div><div class="im">
Subject: Re: [gmx-users] water medium<br>
To: <a href="mailto:jalemkul@vt.edu" target="_blank">jalemkul@vt.edu</a>, Discussion list for GROMACS users<br>
<<a href="mailto:gmx-users@gromacs.org" target="_blank">gmx-users@gromacs.org</a>><br></div>
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<br>
but genion only accepts one type of ion, how can we insert different types?<br>
<br></div><div class="im">
On Tue, May 18, 2010 at 3:38 PM, Justin A. Lemkul <<a href="mailto:jalemkul@vt.edu" target="_blank">jalemkul@vt.edu</a>> wrote:<br>
<br>
> ><br>
> ><br>
> > tahereh tekieh wrote:<br>
> ><br>
>> >> dear friends<br>
>> >> i want to simulate a water medium in which 5 types of different ions flow<br>
>> >> in it. how can i do that with gromacs?<br>
>> >> thanks<br>
>> >><br>
>> >><br>
> > Assuming they are monoatomic, you can use genion after you have added<br>
> > water. If they are polyatomic, use genbox -ci -nmol (before filling the box<br>
> > with water).<br>
> ><br>
> > -Justin<br>
> ><br>
> > --<br>
> > ========================================<br>
> ><br>
> > Justin A. Lemkul<br>
> > Ph.D. Candidate<br>
> > ICTAS Doctoral Scholar<br>
> > MILES-IGERT Trainee<br>
> > Department of Biochemistry<br>
> > Virginia Tech<br>
> > Blacksburg, VA<br>
> > jalemkul[at]<a href="http://vt.edu" target="_blank">vt.edu</a> | (540) 231-9080<br>
> > <a href="http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin" target="_blank">http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin</a><br>
> ><br>
> > ========================================<br>
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