<html><head><style type="text/css"><!-- DIV {margin:0px;} --></style></head><body><div style="font-family:'times new roman', 'new york', times, serif;font-size:12pt"><div>Hi,</div><div> I am having a problem in a cluster which is I<span class="Apple-style-span" style="font-family: Helvetica, 'new york', times, serif; font-size: medium; ">BM PowerPC 970MPs and running SUSE linux and it has IBM XL C & Fortran compliers ( xlf, xlc ).</span></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium;">I was trying to install gromacs 4 there using open-mpi which is already installed using ibm compilers.</span></font></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium;">Here is my configure command:</span></font></div><div><font class="Apple-style-span"
face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium;"><br></span></font></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium;">./configure --prefix=/N/u/tg-jmondal/BigRed/UTIL/gromacs_mod_4_gcc/ --enable-mpi --program-suffix=mod_4mpi CPPFLAGS=-I/N/soft/linux-sles9-ppc64/fftw3-64-single/include LDFLAGS=-L/N/soft/linux-sles9-ppc64/fftw3-64-single/lib/ --without-x CC=xlc F77=xlf CXX=xlc++</span></font></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium;"><br></span></font></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium;">The configuration part went OK.</span></font></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times,
serif"><span class="Apple-style-span" style="font-size: medium;">But when I wrote make,</span></font></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium;">it fails with following error:</span></font></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium;"><div>"nb_kernel010_ppc_altivec.h", line 42.44: 1506-275 (S) Unexpected text p_nri encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 42.76: 1506-275 (S) Unexpected text iinr encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 42.102: 1506-275 (S) Unexpected text jindex encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 43.70: 1506-275 (S) Unexpected text jjnr encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 43.98: 1506-275 (S) Unexpected text shift encountered.</div><div>"nb_kernel010_ppc_altivec.h",
line 43.124: 1506-275 (S) Unexpected text shiftvec encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 44.70: 1506-275 (S) Unexpected text fshift encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 44.98: 1506-275 (S) Unexpected text gid encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 44.124: 1506-275 (S) Unexpected text pos encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 45.70: 1506-275 (S) Unexpected text faction encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 45.98: 1506-275 (S) Unexpected text charge encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 45.123: 1506-275 (S) Unexpected text p_facel encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 46.69: 1506-275 (S) Unexpected text p_krf encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 46.100: 1506-275 (S) Unexpected text p_crf encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 46.130: 1506-275 (S) Unexpected text Vc
encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 47.70: 1506-275 (S) Unexpected text type encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 47.96: 1506-275 (S) Unexpected text p_ntype encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 47.126: 1506-275 (S) Unexpected text vdwparam encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 48.70: 1506-275 (S) Unexpected text Vvdw encountered.</div><div>"nb_kernel010_ppc_altivec.h", line 48.97: 1506-275 (S) Unexpected text p_tabscale encountered.</div><div>make[5]: *** [nb_kernel010_ppc_altivec.lo] Error 1</div><div>make[5]: Leaving directory `/N/hd01/tg-jmondal/BigRed/GROMACS_MODIFIED/gromacs-4.0.5_gcc/src/gmxlib/nonbonded/nb_kernel_ppc_altivec'</div><div>make[4]: *** [all-recursive] Error 1</div><div>make[4]: Leaving directory `/N/hd01/tg-jmondal/BigRed/GROMACS_MODIFIED/gromacs-4.0.5_gcc/src/gmxlib/nonbonded'</div><div>make[3]: *** [all-recursive] Error 1</div><div>make[3]: Leaving
directory `/N/hd01/tg-jmondal/BigRed/GROMACS_MODIFIED/gromacs-4.0.5_gcc/src/gmxlib'</div><div>make[2]: *** [all-recursive] Error 1</div><div>make[2]: Leaving directory `/N/hd01/tg-jmondal/BigRed/GROMACS_MODIFIED/gromacs-4.0.5_gcc/src'</div><div>make[1]: *** [all] Error 2</div><div>make[1]: Leaving directory `/N/hd01/tg-jmondal/BigRed/GROMACS_MODIFIED/gromacs-4.0.5_gcc/src'</div><div>make: *** [all-recursive] Error 1</div><div><br></div><div>Not sure what it means. Any help to resolve the issue will be highly appreciated.</div><div><br></div><div>Sanku</div></span></font></div><div><font class="Apple-style-span" face="Helvetica, 'new york', times, serif"><span class="Apple-style-span" style="font-size: medium; "><br></span></font></div><div style="position:fixed"></div>
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