I am sorry that was a typo in the mail. It was set to lib <br><br><div class="gmail_quote">On Sat, Jun 19, 2010 at 7:28 PM, Justin A. Lemkul <span dir="ltr"><<a href="mailto:jalemkul@vt.edu">jalemkul@vt.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;"><div class="im"><br>
<br>
Sai Pooja wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi,<br>
<br>
I followed the following steps to install gromacs from the git repository:<br>
<br>
1) installed git<br>
2) got a clone of gromacs using the anonymous option<br>
<br>
3) installed fftw libraries using<br>
./configure --enable-float --prefix=/fs/home/sm868<br>
make<br>
make install<br>
<br>
4)export CPPFLAGS=-I/fs/home/sm868/include<br>
export LDFLAGS=-L/fs/home/sm868/include<br>
<br>
6)ran ./bootstrap<br>
7)ran ./configure --prefix=/fs/home/sm868<br>
8)I get the error - checking for sqrt in -lm... yes<br>
checking for fftw3.h... yes<br>
checking for main in -lfftw3f... no<br>
configure: error: Cannot find fftw3f library<br>
<br>
</blockquote>
<br></div>
You set your LDFLAGS to the /include subdirectory; you want to set it to the /lib subdirectory.<br>
<br>
-Justin<div class="im"><br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Can someone help me with this?<br>
<br>
<br>
Pooja<br>
<br>
-- <br>
Quaerendo Invenietis-Seek and you shall discover.<br>
<br>
</blockquote>
<br></div>
-- <br>
========================================<br>
<br>
Justin A. Lemkul<br>
Ph.D. Candidate<br>
ICTAS Doctoral Scholar<br>
MILES-IGERT Trainee<br>
Department of Biochemistry<br>
Virginia Tech<br>
Blacksburg, VA<br>
jalemkul[at]<a href="http://vt.edu" target="_blank">vt.edu</a> | (540) 231-9080<br>
<a href="http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin" target="_blank">http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin</a><br>
<br>
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</font></blockquote></div><br><br clear="all"><br>-- <br>Quaerendo Invenietis-Seek and you shall discover.<br>