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On 23.07.10 10:30, KACHMAR Ali wrote:
<blockquote cite="mid:COL115-W299BAE3603E494E5FF3992FEA30@phx.gbl"
type="cite">
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--></style>Hi
Flor<br>
<br>
<div>Thank you very much for your help. I don't know what's wrong
in my mac. I successfully installed gromacs, and when I restart my mac,
I tried one of gromacs commands but it did not show up.</div>
<div><br>
</div>
<div>It is realy strang, I have to compile again or what?</div>
</blockquote>
<br>
No just source the GMXRC file contained in the GROMACS/bin directory<br>
<br>
source GMXDIR/bin/GMXRC<br>
<br>
Put this file in your .bash_profile and open a new terminal, then
everything should be ready for start.<br>
<br>
/Flo<br>
<blockquote cite="mid:COL115-W299BAE3603E494E5FF3992FEA30@phx.gbl"
type="cite">
<div><br>
</div>
<div>Ali </div>
<div><br>
</div>
<div><br>
<hr id="stopSpelling">Date: Fri, 23 Jul 2010 10:04:03 +0200<br>
From: <a class="moz-txt-link-abbreviated" href="mailto:dommert@icp.uni-stuttgart.de">dommert@icp.uni-stuttgart.de</a><br>
To: <a class="moz-txt-link-abbreviated" href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a><br>
Subject: Re: [gmx-users] installation: gromacs on Mac.10.5.8 leopard<br>
<br>
On 23.07.10 09:32, KACHMAR Ali wrote:
<blockquote cite="mid:COL115-W57646799A6F3FA9990753DFEA30@phx.gbl">
<style>
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</style>Hi,
<div><br>
</div>
<div> I had already installed xcode. </div>
<div><br>
</div>
<div>I would like to be sure if it is correct my .bash_profile
concerning the gcc and mpicc</div>
<div><br>
<div>export PATH=/usr/local/bin:$PATH</div>
</div>
</blockquote>
<br>
If you have a broke installation of gcc and/or mpicc in /usr/local/bin
then the compilation will fail. This and the following to exports of
the PATH are unnecessary to compile GROMACS on Mac OS X<br>
<blockquote cite="mid:COL115-W57646799A6F3FA9990753DFEA30@phx.gbl">
<div>
<div>export PATH=$PATH:/usr/bin/gcc</div>
<div>export PATH=$PATH:/usr/bin/mpicc</div>
</div>
</blockquote>
<br>
Flo<br>
<br>
</div>
<br>
<hr>Envie de nouveauté ? <a moz-do-not-send="true"
href="http://www.windowslive.fr/nouveau-hotmail/" target="_new">Le
nouveau Hotmail arrive bientôt ! Préparez-vous !</a></blockquote>
<br>
<br>
<pre class="moz-signature" cols="72">--
Florian Dommert
Dipl. Phys.
Institute for Computational Physics
University Stuttgart
Pfaffenwaldring 27
70565 Stuttgart
Germany
Tel: +49 - 711 / 6856-3613
Fax: +49 - 711 / 6856-3658
EMail: <a class="moz-txt-link-abbreviated" href="mailto:dommert@icp.uni-stuttgart.de">dommert@icp.uni-stuttgart.de</a>
Home: <a class="moz-txt-link-freetext" href="http://www.icp.uni-stuttgart.de/~icp/Florian_Dommert">http://www.icp.uni-stuttgart.de/~icp/Florian_Dommert</a>
!! PGP-ENCODED emails preferred !!</pre>
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