Hi there,<div><br></div><div>I've tried before and the error still basically the same (line error in 'nb_kernel400_x86_64_sse.c' was 630, now's 629) .</div><div><br></div><div>I am using gmx 4.5 release-4-5-patches branch.</div>
<div><br></div><div><div>git pull</div><div>rm -fr build</div><div>mkdir -p build</div><div>cd build</div><div>cmake -D BUILD_SHARED_LIBS=ON -DGMX_OPENMM=OFF ..</div><div>make clean</div><div>make -j 2</div><div>sudo make install # all fine till here</div>
<div>make clean</div><div>export OPENMM_ROOT_DIR=/usr/local/openmm</div><div>cmake -D BUILD_SHARED_LIBS=OFF -DGMX_OPENMM=ON ..</div><div>make mdrun</div><div><br></div><div>[snip]</div><div><div>[ 56%] Building C object src/gmxlib/CMakeFiles/gmx.dir/version.c.o</div>
<div>[ 56%] Building C object src/gmxlib/CMakeFiles/gmx.dir/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c.o</div><div>/Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c: In function ‘nb_kernel400nf_x86_64_sse’:</div>
<div>/Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c:629: error: ‘gmx_invsqrt_exptab’ undeclared (first use in this function)</div><div>/Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c:629: error: (Each undeclared identifier is reported only once</div>
<div>/Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c:629: error: for each function it appears in.)</div><div>/Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c:629: error: ‘gmx_invsqrt_fracttab’ undeclared (first use in this function)</div>
<div>make[3]: *** [src/gmxlib/CMakeFiles/gmx.dir/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c.o] Error 1</div><div>make[2]: *** [src/gmxlib/CMakeFiles/gmx.dir/all] Error 2</div><div>make[1]: *** [src/kernel/CMakeFiles/mdrun.dir/rule] Error 2</div>
<div>make: *** [mdrun] Error 2</div></div><div><br></div>Any help would be appreciated.</div><div><br></div><div>Thanks,</div><div><br></div><div>Alan<br>-- <br>Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate<br>
Department of Biochemistry, University of Cambridge. <br>80 Tennis Court Road, Cambridge CB2 1GA, UK.<br>>><a href="http://www.bio.cam.ac.uk/~awd28" target="_blank">http://www.bio.cam.ac.uk/~awd28</a><<<br>
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