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<div style="">Dear Mark,<br>
<br>
It works. <br>
<br>
Thanks,<br>
<br>
lina <br>
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<div style="direction: ltr;" id="divRpF556394"><font size="2" color="#000000" face="Tahoma"><b>From:</b> gmx-users-bounces@gromacs.org [gmx-users-bounces@gromacs.org] on behalf of Mark Abraham [mark.abraham@anu.edu.au]<br>
<b>Sent:</b> Thursday, August 26, 2010 1:48 PM<br>
<b>To:</b> Discussion list for GROMACS users<br>
<b>Subject:</b> Re: [gmx-users] How to calculate the distances<br>
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<div>----- Original Message -----<br>
From: #ZHAO LINA# <ZHAO0139@e.ntu.edu.sg><br>
Date: Thursday, August 26, 2010 15:17<br>
Subject: [gmx-users] How to calculate the distances<br>
To: "gmx-users@gromacs.org" <gmx-users@gromacs.org><br>
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<div style=""><font style="font-style: normal; font-weight: normal; background-color: rgb(245, 248, 240); font-size: 14px;">>
</font> Hi all,<br>
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<font style="font-style: normal; font-weight: normal; background-color: rgb(245, 248, 240); font-size: 14px;">>
</font>I guess the question I'm going to ask probably is a bit simple to those who know, well. After MD, I got a dimer, how could I get the distance of those two proteins, the centre of mass distance. In this simulation, there were six involved, but I only
want to calculate the two of them.<br>
<br>
Probably g_dist. See section 7.4 of the manual for some clues, and then the man pages of the individual tools for more information.<br>
<br>
Mark<br>
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