Hi, <br><br>I am using simulation for a membrane protein.<br>So i have downloaded the dppc.pdb along with it's topology files.<br>I have used the following steps for the simulation (Based on the link:<br><a href="http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/membrane_protein/01_pdb2gmx.html">http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/membrane_protein/01_pdb2gmx.html</a>).<br>
<br>We have used the commands and steps as described in the above link.<br>But we have got a fatal error (Atom type C not found) while running this command, <br><br>grompp -f mini.mdp -c dppc128.gro -p topol_dppc.top -o <a href="http://em.tp">em.tp</a><br>
<br>I cant sort out this problem.<br>Please anybody help me to sort out this problem.<br>Awaiting for your valuable replies.<br><br>Praba<br>