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Problem solved, <br>
I've recompiled gromacs with option adding "-L/usr/lib -ldl" and after
setting the VMD_PLUGIN_PATH environment variable<br>
gromacs works. <br>
<br>
<br>
<br>
On 30/09/2010 16:03, Roland Schulz wrote:
<blockquote
cite="mid:AANLkTinxQm+STtr6_2jsfLM_3oa==REG7P70UmbRekeY@mail.gmail.com"
type="cite">Hi,
<div><br>
</div>
<div>Do you get any other messages before that last message? It might
tell you that you have to set the VMD_PLUGIN_PATH.</div>
<div><br>
</div>
<div>GROMACS has to be compiled with dlopen support for this to work.
Did you compile with cmake or configure? Could you please look into the
config.h and see whether GMX_DLOPEN is set?</div>
<div><br>
</div>
<div>Roland<br>
<br>
<div class="gmail_quote">On Thu, Sep 30, 2010 at 9:30 AM, Francesco
Oteri <span dir="ltr"><<a moz-do-not-send="true"
href="mailto:francesco.oteri@gmail.com">francesco.oteri@gmail.com</a>></span>
wrote:<br>
<blockquote class="gmail_quote"
style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
<div bgcolor="#ffffff" text="#000000">Dear all, <br>
I would like to know how to analyze dcd trajectory in gromacs.<br>
I successfully installed gromacs, but if I use<br>
<br>
<br>
trjconv -f neck.dcd -s ../neck_model.pdb -o next.xtc<br>
<br>
I obtain the following error:<br>
<br>
<br>
Fatal error:<br>
Not supported in read_first_frame: neck.dcd<br>
<br>
<br>
<br>
Any suggestion?<br>
<span
style="border-collapse: separate; color: rgb(0, 0, 0); font-family: 'Times New Roman'; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; font-size: medium;"><span
style="font-family: arial,sans-serif; font-size: 24px;"></span></span>
</div>
<br>
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