Hi everyone, <br><br>please I need some help on g_hbond.<br><br>I concatenated 3 trajectories. I ran g_hbond on the concatenated trajectory. I got the result of h_bonds.<br>Then I wanted to run g_hbond on each of my 3 trajectories. Here, I get a different result, it means: if I take the first 10ps of my concatenated trajectory and I run g_hbond on these 10ps. I get some H-bonds eg. Gly(N)...H(gly)...O<br>
but this same H-bond doesn't appear in the first 10ps of my concatenated trajectory's HBmap.<br><br>Please does anyone have an idea where I might have done a mistake?<br><br>
Thank you,<br>Carla<br><br>