Dear justin<br>Thank you<br>I will do that.<br><br><div class="gmail_quote">On Sun, Oct 17, 2010 at 7:12 PM, Justin A. Lemkul <span dir="ltr"><<a href="mailto:jalemkul@vt.edu">jalemkul@vt.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
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<br>
mohsen ramezanpour wrote:<br>
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Dear Gromacs users<br>
<br>
I am searching for a good text for underestanding analysis tools.<br>
Of course I had read the user manual (chapter 8),But I think I need more about them.for example I want a mathematical description<br>
and an easy explanation of analysis tool's results from a MD trajectory.<br>
Please let me know if you know a good reference.<br>
</blockquote>
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This is a bit of a broad request, one that is not easily satisfied. For more complex algorithms, the manual cites the relevant literature. For more simple tasks, even Wikipedia usually has a reasonable answer.<br>
<br>
Other than that, start looking for molecular modeling text books and prepare for a long time reading.<br>
<br>
-Justin<div class="im"><br>
<br>
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thanks in advance<br>
Best<br>
Mohsen<br>
<br>
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-- <br>
========================================<br>
<br>
Justin A. Lemkul<br>
Ph.D. Candidate<br>
ICTAS Doctoral Scholar<br>
MILES-IGERT Trainee<br>
Department of Biochemistry<br>
Virginia Tech<br>
Blacksburg, VA<br>
jalemkul[at]<a href="http://vt.edu" target="_blank">vt.edu</a> | (540) 231-9080<br>
<a href="http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin" target="_blank">http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin</a><br>
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