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<DIV><FONT size=2 face=Verdana>But later LD_LIBRARY_PATH is redefined as
</FONT></DIV>
<DIV> </DIV>
<DIV><FONT size=2 face=Verdana>LD_LIBRARY_PATH=${GMXLDLIB}${LD_LIBRARY_PATH}
</FONT></DIV>
<DIV><FONT size=2 face=Verdana></FONT> </DIV>
<DIV>without a colon between <FONT color=#000080><FONT color=#000000>${GMXLDLIB}
and ${LD_LIBRARY_PATH}</FONT> <FONT size=2 face=Verdana>
<HR style="WIDTH: 100px" align=left color=#b5c4df SIZE=1>
</FONT></FONT></DIV>
<DIV><FONT color=#c0c0c0 size=2 face=Verdana><SPAN>Ye MEI</SPAN>
</FONT></DIV>2010-11-08
<HR color=#b5c4df SIZE=1>
<DIV><FONT size=2 face=Verdana><STRONG>From:</STRONG> Roland Schulz
</FONT></DIV>
<DIV><FONT size=2 face=Verdana><STRONG>Date:</STRONG> 2010-11-08 15:31:24
</FONT></DIV>
<DIV><FONT size=2 face=Verdana><STRONG>To:</STRONG> Discussion list for GROMACS
users </FONT></DIV>
<DIV><FONT size=2 face=Verdana><STRONG>CC:</STRONG> </FONT></DIV>
<DIV><FONT size=2 face=Verdana><STRONG>Subject:</STRONG> Re: [gmx-users] a bug
in GMXRC.bash </FONT></DIV>
<DIV><FONT size=2 face=Verdana></FONT> </DIV>
<DIV><FONT size=2 face=Verdana>This was removed for security reasons. The
leading colon adds the local directory to the list of directories searched for
libraries. Why does your setup require the colon?
<DIV><BR></DIV>
<DIV>Roland<BR><BR>
<DIV class=gmail_quote>On Mon, Nov 8, 2010 at 2:04 AM, Ye MEI <SPAN
dir=ltr><<A
href="mailto:ymei@itcs.ecnu.edu.cn">ymei@itcs.ecnu.edu.cn</A>></SPAN>
wrote:<BR>
<BLOCKQUOTE
style="BORDER-LEFT: #ccc 1px solid; MARGIN: 0px 0px 0px 0.8ex; PADDING-LEFT: 1ex"
class=gmail_quote>
<DIV style="MARGIN: 10px; FONT-FAMILY: verdana; FONT-SIZE: 10pt">
<DIV><FONT size=2 face=Verdana>
<DIV><FONT size=2 face=Verdana>Dear Gromacs developers,</FONT></DIV>
<DIV> </DIV>
<DIV>I noticed that the GMXRC.bash has been updated in gromacs 4.5.2, which
leads to a wrong manipulation to the LD_LIBRARY_PATH variable. </DIV>
<DIV>The leading colon is missing, when exporting this variable for the first
time.</DIV>
<DIV> </DIV></FONT></DIV>
<DIV><FONT size=2 face=Verdana></FONT> </DIV>
<DIV align=left><FONT color=#c0c0c0 size=2 face=Verdana>2010-11-08
</FONT></DIV><FONT size=2 face=Verdana>
<HR style="MIN-HEIGHT: 2px; WIDTH: 122px" align=left SIZE=2>
<DIV><FONT color=#c0c0c0 size=2 face=Verdana><SPAN>Ye MEI</SPAN>
</FONT></DIV></FONT></DIV><BR>--<BR>gmx-users mailing list <A
href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</A><BR><A
href="http://lists.gromacs.org/mailman/listinfo/gmx-users"
target=_blank>http://lists.gromacs.org/mailman/listinfo/gmx-users</A><BR>Please
search the archive at <A
href="http://www.gromacs.org/Support/Mailing_Lists/Search"
target=_blank>http://www.gromacs.org/Support/Mailing_Lists/Search</A> before
posting!<BR>Please don't post (un)subscribe requests to the list. Use
the<BR>www interface or send it to <A
href="mailto:gmx-users-request@gromacs.org">gmx-users-request@gromacs.org</A>.<BR>Can't
post? Read <A href="http://www.gromacs.org/Support/Mailing_Lists"
target=_blank>http://www.gromacs.org/Support/Mailing_Lists</A><BR></BLOCKQUOTE></DIV><BR><BR
clear=all><BR>-- <BR>ORNL/UT Center for Molecular Biophysics <A
href="http://cmb.ornl.gov">cmb.ornl.gov</A><BR>865-241-1537, ORNL PO BOX 2008
MS6309<BR></DIV></FONT></DIV></BODY></HTML>