hello<br>Merry Christmas.....<br><br>this is my topol_pope.top file<br>; Include chain topologies<br>#include "forcefield.itp"<br>#include "pope.itp"<br><br>; Include water topology<br>#include "spc.itp"<br>
<br>; Include ion topologies<br>#include "ions.itp"<br><br>; System specifications<br>[ system ]<br>340-Lipid POPE Bilayer<br><br>[ molecules ]<br>; molecule name nr.<br>POPE 340<br>SOL 6729<br><br><br>but it should contain protein molecule .what should be topology file ,, how to generate that for system.gro according to tutorial. my protein has 344 molecules .<br>
I tried to use g_x2top but it is not available for gromos53a6.<br><br>help!<br>thank for ur support !<br><br>with regards :<br><br>shikha<br><br>