<html><head></head><body>Dear All <br />I asked this question in Martini's
forum, but tile now no answer, so I had to ask it here. excuse me. <br />I
did an atomistic peptide simulation. The residues and positions of all
atoms in this peptide created by my self, I mean I didn't download the pdb
file from <www.pdb.org>. at the end of atomistic simulation I have
.pdb and .gro files that show the minimized structure of the peptide. <br
/><br />Now I have a question: Can I use the last pdb file for a CG
peptide? Can I use atom2cg.awk and seq2itp.pl in this case? <br /><br
/>Thank you <br />Kargar <br /><br /><br /><br />--
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