Dear Mark,<br><br>The chain identifier have continuous. <span id="result_box" class="short_text" lang="en"><span title="Alternatif çevirileri görmek için tıklayın" class="hps">In sequence</span> <span title="Alternatif çevirileri görmek için tıklayın" class="hps">does not show</span> <span title="Alternatif çevirileri görmek için tıklayın" class="hps">any</span> <span title="Alternatif çevirileri görmek için tıklayın" class="hps">problem</span></span>.<br>
<br><br><br><div class="gmail_quote">29 Aralık 2010 15:10 tarihinde Mark Abraham <span dir="ltr"><<a href="mailto:Mark.Abraham@anu.edu.au">Mark.Abraham@anu.edu.au</a>></span> yazdı:<br><blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
<div class="im">On 29/12/2010 10:12 PM, ahmet yıldırım wrote:<br>
<blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
Dear users,<br>
<br>
ab@ubuntu:~/Desktop/3O87$ pdb2gmx -f 3O87.pdb -water tip3p<br>
<br>
Select the Force Field:<br>
5: OPLS-AA/L all-atom force field (2001 aminoacid dihedrals)<br>
<br>
Fatal error:<br>
Chain identifier 'A' was used in two non-sequential blocks (residue 710, atom 54 49)<br>
<br>
What should I do to correct this error?<br>
</blockquote>
<br></div>
Look at the entries whose chain identifier is A, and see why they are non-sequential, and take suitable action to remedy. You may need to Google for the PDB file format if you don't already understand it.<br>
<br>
Mark<div><div></div><div class="h5"><br>
<br>
<blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
<br>
Thanks in advance<br>
<br>
-- <br>
Ahmet YILDIRIM<br>
</blockquote>
<br></div></div><font color="#888888">
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</font></blockquote></div><br><br clear="all"><br>-- <br>Ahmet YILDIRIM<br>