Thanks a lot for your reply..<br><br><div class="gmail_quote">On Mon, Jan 3, 2011 at 6:07 PM, Mark Abraham <span dir="ltr"><<a href="mailto:Mark.Abraham@anu.edu.au">Mark.Abraham@anu.edu.au</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
<div><div></div><div class="h5">On 2/01/2011 2:18 PM, sreelakshmi ramesh wrote:<br>
<blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
Dear all,<br>
I have a protein in water and i have simulated it for few nanoseconds and i now i wanted to monitor the The sum of the O-H distances (in Ε) of the backbone<br>
hydrogen bonds ROH:i dono how to extract the value from the trajectory file.Any siuggestion please.Thanks in advance<br>
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Look in section 7.4 of the manual for a suitable tool for extracting the raw distances. You'll need some other non-GROMACS tool to add them up.<br>
<br>
Mark<br><font color="#888888">
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