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Thanks a lot for the clarification, now it works perfectly. Sorry for the confusion!<br>Best wishes,<br>Rebeca.<br><br>> Date: Fri, 14 Jan 2011 13:46:26 -0500<br>> From: jalemkul@vt.edu<br>> To: gmx-users@gromacs.org<br>> Subject: Re: [gmx-users] g_analyze with multiple sets<br>> <br>> <br>> <br>> Rebeca García Fandiño wrote:<br>> > Hello,<br>> > I have several files containing two columns, x and y (x is the same for <br>> > all of them).<br>> > I would like to calculate the average and standar deviation (as the <br>> > error bar) for the y column for all my data sets.<br>> > I have tried using g_analyze:<br>> > <br>> > g_analyze -n 3 -av average.xvg -errbar stddev -f set1.xvg & set2.xvg & <br>> > set3.xvg<br>> > <br>> > I get several errors:<br>> > set2.xvg: Command not found<br>> > set3.xvg: Command not found<br>> > <br>> > And also: "Set 2 is horter (0) than the previous set (1775)<br>> > <br>> > I have seen a similar error in the gromacs list archive, and the problem <br>> > seemed to be the space before the &. I remove this whitespace and also <br>> > the space after the &, but I get the same results.<br>> > <br>> > How could I solve this problem?<br>> > <br>> <br>> g_analyze does not take multiple simultaneous input. The "&" referred to in the <br>> help text refers to data sets within the same .xvg file that are separated by &.<br>> <br>> -Justin<br>> <br>> > Thanks a lot for your help in advance.<br>> > <br>> > Best wishes,<br>> > <br>> > Rebeca Garcia<br>> > Postdoctoral student<br>> > Santiago de Compostela University<br>> > Spain<br>> > regafan@hotmail.com<br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <#><br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <#><br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <#><br>> > <br>> > <br>> > <#><br>> > <br>> > <br>> > <br>> > <br>> > <br>> <br>> -- <br>> ========================================<br>> <br>> Justin A. Lemkul<br>> Ph.D. Candidate<br>> ICTAS Doctoral Scholar<br>> MILES-IGERT Trainee<br>> Department of Biochemistry<br>> Virginia Tech<br>> Blacksburg, VA<br>> jalemkul[at]vt.edu | (540) 231-9080<br>> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin<br>> <br>> ========================================<br>> -- <br>> gmx-users mailing list gmx-users@gromacs.org<br>> http://lists.gromacs.org/mailman/listinfo/gmx-users<br>> Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!<br>> Please don't post (un)subscribe requests to the list. Use the <br>> www interface or send it to gmx-users-request@gromacs.org.<br>> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists<br><div style="font-size: 11px; visibility: hidden; position: absolute; z-index: 11000; top: -100px;" id="ArrowLayer1d6eihk"><img style="font-size: 11px; width: 0px; height: 0px; position: absolute; z-index: 11001; top: 0px; left: 0px;" id="arrow_bg_image"></div><div style="font-size: 11px; visibility: hidden; position: absolute; z-index: 11000; top: -100px; background-image: url("sacore:inv.gif");" id="InvLayer1d6eihk"></div><div id="BubbleLayer1d6eihk" style="font-size: 11px; text-align: left; visibility: hidden; position: absolute; z-index: 11002; top: -100px;"> <div style="position: absolute; left: 18px; top: 2px; height: 50px;" id="BALLOONLOGODIV1d6eihk"><table style="height: 100%; border: 0pt none;"><tbody><tr><td style="border: 0pt none;" id="BALLOONLOGO1d6eihk"><img alt="" src="sacore:empty.gif"></td></tr></tbody></table></div>
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