<html><head><style type="text/css"><!-- DIV {margin:0px;} --></style></head><body><div style="font-family:arial,helvetica,sans-serif;font-size:10pt;color:#000000;"><div>Hi,<br><br>I've used g_confrms from gromacs-4.5.1 to compare two structures with the following command line -<br><br> g_confrms -f1 1OMB.pdb -f2 md.gro -o fit.pdb<br><br>fit.pdb
is supposed to be the output file which would show the 2 structures superimposed on
each other. But when I visualised it with vmd. I can only see one
structure.<br>
<br>Any idea what's going on? I hereby attached part of the generated fit.pdb.<br><br>All suggestions are welcomed.<br><br>Regards,<br>Joyce<br></div>
</div><br></body></html>