<table cellspacing="0" cellpadding="0" border="0" ><tr><td valign="top" style="font: inherit;"><div><span style="font-size: 10pt; color: black; "><font class="Apple-style-span" face="Arial, sans-serif"><span class="Apple-style-span" style="line-height: 14px;"><span lang="EN-US" style="font-size:12.0pt;mso-bidi-font-size:
11.0pt;line-height:115%;font-family:"Times New Roman","serif";mso-fareast-font-family:
Calibri;mso-fareast-theme-font:minor-latin;mso-bidi-theme-font:minor-bidi;
mso-ansi-language:EN-US;mso-fareast-language:EN-US;mso-bidi-language:AR-SA">Dear
gmx-users,</span><span lang="EN-US" style="font-size:10.0pt;line-height:115%;
font-family:"Arial","sans-serif";mso-fareast-font-family:Calibri;mso-fareast-theme-font:
minor-latin;color:black;mso-ansi-language:EN-US;mso-fareast-language:EN-US;
mso-bidi-language:AR-SA"><br>
<br>
</span><span lang="EN-US" style="font-size:12.0pt;mso-bidi-font-size:11.0pt;
line-height:115%;font-family:"Times New Roman","serif";mso-fareast-font-family:
Calibri;mso-fareast-theme-font:minor-latin;mso-bidi-theme-font:minor-bidi;
mso-ansi-language:EN-US;mso-fareast-language:EN-US;mso-bidi-language:AR-SA">I
completed a MD (10 ns) of my protein-membrane system. When I perform</span><span lang="EN-US" style="font-size:12.0pt;mso-bidi-font-size:11.0pt;line-height:115%;
font-family:"Times New Roman","serif";mso-fareast-font-family:Calibri;
mso-fareast-theme-font:minor-latin;mso-bidi-theme-font:minor-bidi;mso-ansi-language:
ES-MX;mso-fareast-language:EN-US;mso-bidi-language:AR-SA"> </span><span lang="EN-US" style="font-size:12.0pt;mso-bidi-font-size:11.0pt;line-height:115%;
font-family:"Times New Roman","serif";mso-fareast-font-family:Calibri;
mso-fareast-theme-font:minor-latin;mso-bidi-theme-font:minor-bidi;mso-ansi-language:
EN-US;mso-fareast-language:EN-US;mso-bidi-language:AR-SA">a visual inspection
(VMD) of md_0_1.gro </span><span style="font-size:12.0pt;mso-bidi-font-size:
11.0pt;line-height:115%;font-family:"Times New Roman","serif";mso-fareast-font-family:
Calibri;mso-fareast-theme-font:minor-latin;mso-bidi-theme-font:minor-bidi;
mso-ansi-language:ES-MX;mso-fareast-language:EN-US;mso-bidi-language:AR-SA">file
I</span><span lang="EN-US" style="font-size:12.0pt;mso-bidi-font-size:11.0pt;
line-height:115%;font-family:"Times New Roman","serif";mso-fareast-font-family:
Calibri;mso-fareast-theme-font:minor-latin;mso-bidi-theme-font:minor-bidi;
mso-ansi-language:EN-US;mso-fareast-language:EN-US;mso-bidi-language:AR-SA">
observed a few water</span><span lang="EN-US" style="font-size:12.0pt;mso-bidi-font-size:
11.0pt;line-height:115%;font-family:"Times New Roman","serif";mso-fareast-font-family:
Calibri;mso-fareast-theme-font:minor-latin;mso-bidi-theme-font:minor-bidi;
mso-ansi-language:ES-MX;mso-fareast-language:EN-US;mso-bidi-language:AR-SA"> </span><span lang="EN-US" style="font-size:12.0pt;mso-bidi-font-size:11.0pt;line-height:115%;
font-family:"Times New Roman","serif";mso-fareast-font-family:Calibri;
mso-fareast-theme-font:minor-latin;mso-bidi-theme-font:minor-bidi;mso-ansi-language:
EN-US;mso-fareast-language:EN-US;mso-bidi-language:AR-SA">molecules within the
bilayer. In previous steps (e.g. equilibration) this was not observed. Could be
expected such behavior?<br>
<br>
Best regards,</span><br></span></font>
<!--[if !supportLineBreakNewLine]--><br style="mso-special-character:line-break">
<!--[endif]--></span><br><div style="font-family: arial; "><div><p align="right" style="text-align:left;"><font class="Apple-style-span" color="#FFFF00" face="Arial" size="2"><b><i></i></b></font></p><p class="MsoNormal"><font class="Apple-style-span" color="#FFFF00" face="Arial" size="2"><b><i><span class="apple-style-span"><span style="font-size:10.0pt;line-height:115%;color:black;">============================== =========</span></span><span style="font-size:10.0pt;line-height:115%;color:black;"><br><span class="apple-style-span">Aldo Segura-Cabrera</span><br><span class="apple-style-span">Laboratorio de Bioinformática</span><br><span class="apple-style-span">Centro de Biotecnología Genómica</span><br><span class="apple-style-span">Instituto Politécnico Nacional</span><br><span class="apple-style-span">Blvd. Del Maestro esquina Elías Piña, 88710</span><br><span class="apple-style-span">Reynosa, Tamaulipas, México.</span><br><span
class="apple-style-span">(899)9243627 ext. 87747</span><br><span class="apple-style-span">e-mail:</span><span class="apple-converted-space"> </span><span class="apple-style-span"><a rel="nofollow" target="_blank" href="mailto:asegurac@ipn.mx"><span style="color:#0658B5;">asegurac@ipn.mx</span></a>;</span><span class="apple-converted-space"> </span><span class="apple-style-span"><a rel="nofollow" target="_blank" href="mailto:aldosegura@gmail.com"><span style="color:#0658B5;">aldosegura@gmail.com</span></a></span><br><span class="apple-style-span">============================== ===========</span></span></i></b></font></p></div></div></div></td></tr></table><br>