<br><br><div class="gmail_quote">On Tue, Mar 8, 2011 at 2:53 PM, Esztermann, Ansgar <span dir="ltr"><<a href="mailto:Ansgar.Esztermann@mpi-bpc.mpg.de">Ansgar.Esztermann@mpi-bpc.mpg.de</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
<div class="im"><br>
On Mar 8, 2011, at 12:00 , mohsen ramezanpour wrote:<br>
><br>
>> > Besides when I used the following command I get an executeable Error:<br>
>> > mpirun -np 8 mdrun_mpi -deffnm output &<br>
>><br>
>> What is the error message?<br>
><br>
> the Error is:<br>
> Failed to find the following executable:<br>
><br>
> Host: compute-0-4.local<br>
> Executable: mdrun_mpi<br>
><br>
> Cannot continue.<br>
<br>
</div>Is mdrun_mpi available on compute-0-4? If so, it's just a matter of using the right path: your shell knows where to look for the executable, but mpirun does not. Try<br>
<br></blockquote><div>Sorry,You are right.There is not any mdrun_mpi on Nodes.<br>Thank you.<br>Besides there are not any followings on nodes:<br>mdrun_mpi mdrun_mpi_d.openmpi mdrun_d mdrun_mpi_d mdrun_mpi.openmpi mpiexec.openmpi mpirun.openmpi<br>
Do I need to install some of these on cluster to be able run mdrun on all Nodes?<br>Thanks in advance for your guidances<br> <br></div><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
mpirun -np 8 `which mdrun_mpi` -deffnm output &<br>
<br>
instead. Note the "backticks" (`).<br>
<div><div></div><div class="h5"><br>
A.<br>
--<br>
Ansgar Esztermann<br>
DV-Systemadministration<br>
Max-Planck-Institut für biophysikalische Chemie, Abteilung 105<br>
<br>
--<br>
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