/usr/bin/cmake -H/scratch/jingles/gcc/gromacs-4.5.3 -B/scratch/jingles/gcc/gromacs-4.5.3 --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 install-mdrun make[1]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' /usr/bin/cmake -H/scratch/jingles/gcc/gromacs-4.5.3 -B/scratch/jingles/gcc/gromacs-4.5.3 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /scratch/jingles/gcc/gromacs-4.5.3/CMakeFiles 75 make -f CMakeFiles/Makefile2 src/kernel/CMakeFiles/install-mdrun.dir/all make[2]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' make -f src/gmxlib/CMakeFiles/gmx.dir/build.make src/gmxlib/CMakeFiles/gmx.dir/depend make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' cd /scratch/jingles/gcc/gromacs-4.5.3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/gmxlib /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/gmxlib /scratch/jingles/gcc/gromacs-4.5.3/src/gmxlib/CMakeFiles/gmx.dir/DependInfo.cmake --color= make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make -f src/gmxlib/CMakeFiles/gmx.dir/build.make src/gmxlib/CMakeFiles/gmx.dir/build make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' make[3]: Nothing to be done for `src/gmxlib/CMakeFiles/gmx.dir/build'. make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' /usr/bin/cmake -E cmake_progress_report /scratch/jingles/gcc/gromacs-4.5.3/CMakeFiles 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 [ 78%] Built target gmx make -f src/mdlib/CMakeFiles/md.dir/build.make src/mdlib/CMakeFiles/md.dir/depend make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' cd /scratch/jingles/gcc/gromacs-4.5.3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/mdlib /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/mdlib /scratch/jingles/gcc/gromacs-4.5.3/src/mdlib/CMakeFiles/md.dir/DependInfo.cmake --color= make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make -f src/mdlib/CMakeFiles/md.dir/build.make src/mdlib/CMakeFiles/md.dir/build make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' make[3]: Nothing to be done for `src/mdlib/CMakeFiles/md.dir/build'. make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' /usr/bin/cmake -E cmake_progress_report /scratch/jingles/gcc/gromacs-4.5.3/CMakeFiles 88 89 90 91 92 93 94 95 96 97 [ 92%] Built target md make -f src/kernel/CMakeFiles/gmxpreprocess.dir/build.make src/kernel/CMakeFiles/gmxpreprocess.dir/depend make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' cd /scratch/jingles/gcc/gromacs-4.5.3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel /scratch/jingles/gcc/gromacs-4.5.3/src/kernel/CMakeFiles/gmxpreprocess.dir/DependInfo.cmake --color= make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make -f src/kernel/CMakeFiles/gmxpreprocess.dir/build.make src/kernel/CMakeFiles/gmxpreprocess.dir/build make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' make[3]: Nothing to be done for `src/kernel/CMakeFiles/gmxpreprocess.dir/build'. make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' /usr/bin/cmake -E cmake_progress_report /scratch/jingles/gcc/gromacs-4.5.3/CMakeFiles 83 84 85 86 87 [ 98%] Built target gmxpreprocess make -f src/kernel/gmx_gpu_utils/CMakeFiles/gmx_gpu_utils.dir/build.make src/kernel/gmx_gpu_utils/CMakeFiles/gmx_gpu_utils.dir/depend make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' cd /scratch/jingles/gcc/gromacs-4.5.3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel/gmx_gpu_utils /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel/gmx_gpu_utils /scratch/jingles/gcc/gromacs-4.5.3/src/kernel/gmx_gpu_utils/CMakeFiles/gmx_gpu_utils.dir/DependInfo.cmake --color= make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make -f src/kernel/gmx_gpu_utils/CMakeFiles/gmx_gpu_utils.dir/build.make src/kernel/gmx_gpu_utils/CMakeFiles/gmx_gpu_utils.dir/build make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' make[3]: Nothing to be done for `src/kernel/gmx_gpu_utils/CMakeFiles/gmx_gpu_utils.dir/build'. make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' /usr/bin/cmake -E cmake_progress_report /scratch/jingles/gcc/gromacs-4.5.3/CMakeFiles [ 98%] Built target gmx_gpu_utils make -f src/kernel/CMakeFiles/openmm_api_wrapper.dir/build.make src/kernel/CMakeFiles/openmm_api_wrapper.dir/depend make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' cd /scratch/jingles/gcc/gromacs-4.5.3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel /scratch/jingles/gcc/gromacs-4.5.3/src/kernel/CMakeFiles/openmm_api_wrapper.dir/DependInfo.cmake --color= make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make -f src/kernel/CMakeFiles/openmm_api_wrapper.dir/build.make src/kernel/CMakeFiles/openmm_api_wrapper.dir/build make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' make[3]: Nothing to be done for `src/kernel/CMakeFiles/openmm_api_wrapper.dir/build'. make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' /usr/bin/cmake -E cmake_progress_report /scratch/jingles/gcc/gromacs-4.5.3/CMakeFiles [ 98%] Built target openmm_api_wrapper make -f src/kernel/CMakeFiles/mdrun.dir/build.make src/kernel/CMakeFiles/mdrun.dir/depend make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' cd /scratch/jingles/gcc/gromacs-4.5.3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel /scratch/jingles/gcc/gromacs-4.5.3/src/kernel/CMakeFiles/mdrun.dir/DependInfo.cmake --color= make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make -f src/kernel/CMakeFiles/mdrun.dir/build.make src/kernel/CMakeFiles/mdrun.dir/build make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' make[3]: Nothing to be done for `src/kernel/CMakeFiles/mdrun.dir/build'. make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' /usr/bin/cmake -E cmake_progress_report /scratch/jingles/gcc/gromacs-4.5.3/CMakeFiles 98 [100%] Built target mdrun make -f src/kernel/CMakeFiles/install-mdrun.dir/build.make src/kernel/CMakeFiles/install-mdrun.dir/depend make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' cd /scratch/jingles/gcc/gromacs-4.5.3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel /scratch/jingles/gcc/gromacs-4.5.3 /scratch/jingles/gcc/gromacs-4.5.3/src/kernel /scratch/jingles/gcc/gromacs-4.5.3/src/kernel/CMakeFiles/install-mdrun.dir/DependInfo.cmake --color= make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make -f src/kernel/CMakeFiles/install-mdrun.dir/build.make src/kernel/CMakeFiles/install-mdrun.dir/build make[3]: Entering directory `/scratch/jingles/gcc/gromacs-4.5.3' /usr/bin/cmake -E cmake_progress_report /scratch/jingles/gcc/gromacs-4.5.3/CMakeFiles [100%] Installing mdrun cd /scratch/jingles/gcc/gromacs-4.5.3/src/kernel && /usr/bin/cmake -DCOMPONENT=mdrun -P /scratch/jingles/gcc/gromacs-4.5.3/cmake_install.cmake -- Install configuration: "Release" -- Install component: "mdrun" CMake Error at cmake_install.cmake:44 (FILE): file INSTALL cannot find "/scratch/jingles/gcc/gromacs-4.5.3/src/kernel/CMakeFiles/CMakeRelink.dir/mdrun-gpu". Call Stack (most recent call first): /scratch/jingles/gcc/gromacs-4.5.3/src/cmake_install.cmake:39 (INCLUDE) /scratch/jingles/gcc/gromacs-4.5.3/cmake_install.cmake:40 (INCLUDE) make[3]: *** [src/kernel/CMakeFiles/install-mdrun] Error 1 make[3]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make[2]: *** [src/kernel/CMakeFiles/install-mdrun.dir/all] Error 2 make[2]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make[1]: *** [src/kernel/CMakeFiles/install-mdrun.dir/rule] Error 2 make[1]: Leaving directory `/scratch/jingles/gcc/gromacs-4.5.3' make: *** [install-mdrun] Error 2