Dear users, <br><br> I was using g_covar (gmx 4.5.3) to find the eigenvalue and <br>eigenvectors. When I used for "protein" which is actually - 3740 in<br>number, it gave a total of 11220 eigenvalues, similarly for bacbone,<br>
c-alpha atoms, the number of eigenvalues given was not matching <br>with the number of atoms in question.<br>I presume that the number of eigenvalues generated should correspond<br>to the number of atoms considered in question. <br>
But the xpm file generated corresponds with the query given ie., protein,<br>C-alpha or backbone as expected.<br><br>Kindly clarify my doubts. <br><br>Thank you<br>With regards<br>M. Kavyashree<br>