<p>Did you make the molecules whole and removed jumps (in case of a multimer) prior to filtering?</p>
<p>Cheers,</p>
<p>Tsjerk</p>
<p><blockquote type="cite">On Jun 24, 2011 8:10 PM, "Kavyashree M" <<a href="mailto:hmkvsri@gmail.com">hmkvsri@gmail.com</a>> wrote:<br><br>Dear user, <br><br>When projection of a trajectory (50ns) on an eigen vector<br>
was visualised in pymol, there was broken chains, but when<br>I projected the simulation (continued for 50 more ns ie.,<br>total 100ns) this broken chain was not seen why?<br>
<br>Thanking you<br>With Regards<br><font color="#888888">M. Kavyashree<br>
</font><br>--<br>
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