<p>Hi Bipin,</p>
<p>You have three coordinates per residue, hence a 3Nx3N matrix.</p>
<p>Cheers,</p>
<p>Tsjerk</p>
<p><blockquote type="cite">On Jun 25, 2011 4:40 PM, "bipin singh" <<a href="mailto:bipinelmat@gmail.com">bipinelmat@gmail.com</a>> wrote:<br><br>Hello,<br>I have calculated the covariance matrix for C-alpha atoms(179 aa) only,but after plotting the correlation, I have observed that it is<br>
of 537X537,instead of179X179.Please suggest me how to get correlation between the C-alpha atoms only.<p><font color="#500050">
On Fri, Jun 24, 2011 at 22:54, Tsjerk Wassenaar <<a href="mailto:tsjerkw@gmail.com">tsjerkw@gmail.com</a>> wrote:
>
> Hi Bipin,
>
> Read...</font></p>-- <br><span style="color:rgb(51, 51, 255)">-----------------------</span><br style="color:rgb(51, 51, 255)">
<i><span style="color:rgb(51, 51, 255)">Regards,</span></i><br style="color:rgb(51, 51, 255)"><font color="#888888"><span style="color:rgb(51, 51, 255);font-family:garamond,serif">Bipin Singh</span><br><br>
</font><br>--<br>
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