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On 8/07/2011 6:35 PM, manoj gadhwal wrote:
<blockquote
cite="mid:CAMbBj-rP6m_bDBYwc8PxakBnZjuQb=5O6=Dvit7n6TknLX3OQw@mail.gmail.com"
type="cite">Hello to all,<br>
I am using the Gromacs 4.5.3 in Centos-5. When
I tried to open the<i><b> .xvg</b></i> file by gnuplot it shown
the error. I am attaching the gnuplot error and the data of .xvg
file. It show that line 9:invalid character. Please help me. <br>
</blockquote>
<br>
The answer can be found by searching for gnuplot or plotting on the
GROMACS webpage. Please search before asking questions, you'll learn
and progress faster.<br>
<br>
Mark<br>
<br>
<blockquote
cite="mid:CAMbBj-rP6m_bDBYwc8PxakBnZjuQb=5O6=Dvit7n6TknLX3OQw@mail.gmail.com"
type="cite">
<br>
Thanks in advance.<br>
<b><br>
gnuplot error:</b><br>
<br>
gnuplot> load "/home/ujj/Ligand/ligand_nvt_potential.xvg"<br>
<br>
gnuplot> @ title "Gromacs Energies"<br>
^<br>
"/home/ujj/Ligand/ligand_nvt_potential.xvg", line 9:
invalid character<br>
<b><br>
<br>
.xvg file:</b><br>
<br>
# This file was created Fri Jul 8 13:48:25 2011<br>
# by the following command:<br>
# /usr/local/gromacs/bin/g_energy -f ligand_nvt.edr -o
ligand_nvt_potential.xvg <br>
#<br>
# g_energy is part of G R O M A C S:<br>
#<br>
# Gromacs Runs One Microsecond At Cannonball Speeds<br>
#<br>
@ title "Gromacs Energies"<br>
@ xaxis label "Time (ps)"<br>
@ yaxis label "(kJ/mol)"<br>
@TYPE xy<br>
@ view 0.15, 0.15, 0.75, 0.85<br>
@ legend on<br>
@ legend box on<br>
@ legend loctype view<br>
@ legend 0.78, 0.8<br>
@ legend length 2<br>
@ s0 legend "Potential"<br>
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91.800000 -241645.968750<br>
92.000000 -242278.046875<br>
92.200000 -242161.531250<br>
92.400000 -242242.656250<br>
92.600000 -242428.156250<br>
92.800000 -243514.468750<br>
93.000000 -243319.765625<br>
93.200000 -243183.281250<br>
93.400000 -242671.921875<br>
93.600000 -242763.046875<br>
93.800000 -242586.640625<br>
94.000000 -242565.281250<br>
94.200000 -242145.234375<br>
94.400000 -242566.500000<br>
94.600000 -242382.468750<br>
94.800000 -242301.437500<br>
95.000000 -242574.390625<br>
95.200000 -242128.531250<br>
95.400000 -241968.015625<br>
95.600000 -242318.781250<br>
95.800000 -242614.875000<br>
96.000000 -243034.734375<br>
96.200000 -243061.171875<br>
96.400000 -242386.781250<br>
96.600000 -242364.687500<br>
96.800000 -241825.093750<br>
97.000000 -242219.500000<br>
97.200000 -242616.296875<br>
97.400000 -242946.593750<br>
97.600000 -242282.437500<br>
97.800000 -242090.421875<br>
98.000000 -241557.671875<br>
98.200000 -242052.671875<br>
98.400000 -242357.828125<br>
98.600000 -242622.953125<br>
98.800000 -242419.546875<br>
99.000000 -242963.156250<br>
99.200000 -242370.125000<br>
99.400000 -242272.656250<br>
99.600000 -242551.593750<br>
99.800000 -242698.000000<br>
100.000000 -242706.312500<br>
<br>
<br clear="all">
<br>
-- <br>
Manoj Kumar Gadhwal (M. Pharma),<br>
Research Schloar,<br>
Prin. K. M. Kundnani College of Pharmacy,<br>
Colaba, Mumbai-05.<br>
Cont. No. +91 9769051866<br>
</blockquote>
<br>
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