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On 29/08/2011 1:38 AM, Sajad Ahrari wrote:
<blockquote
cite="mid:1314545939.93260.YahooMailNeo@web31705.mail.mud.yahoo.com"
type="cite">
<div style="color: rgb(0, 0, 0); background-color: rgb(255, 255,
255); font-family: arial,helvetica,sans-serif; font-size: 12pt;">
<div style="font-family: arial, helvetica, sans-serif;
font-size: 12pt; ">Dear users,</div>
<div><font class="Apple-style-span" face="arial, helvetica,
sans-serif" size="3">is there any command in Gromacs to
show </font><font class="Apple-style-span" face="arial,
helvetica, sans-serif">fluctuations</font><font
class="Apple-style-span" face="arial, helvetica, sans-serif"
size="3"> of distance, between mass center for two groups of
amino-acids in a protein, over time?</font></div>
</div>
</blockquote>
<br>
Check out manual section 7.4 for clues about which tools do what,
and chapter 8 for more detail.<br>
<br>
Mark<br>
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