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On 26/09/2011 5:19 PM, Sajad Ahrari wrote:
<blockquote
cite="mid:1317021541.38809.YahooMailNeo@web31701.mail.mud.yahoo.com"
type="cite">
<div style="color:#000; background-color:#fff; font-family:arial,
helvetica, sans-serif;font-size:12pt">
<div>Dear users</div>
<div>how can I use -shell option with g_<span id="misspell-0"><span
id="misspell-0" class="mark">hbond</span></span> command?
I wish to find h-bonds around a <span id="misspell-1"><span
id="misspell-1"><span>particular</span></span></span> atom
in a <span id="misspell-2"><span id="misspell-2"><span>definite</span></span></span>
distance. how can I introduce the index file and cut off
distance to it?</div>
<br>
</div>
</blockquote>
<br>
See g_hbond -h. You give the radius with -shell and the atom in the
group.<br>
<br>
Mark<br>
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