<html><body><div style="color:#000; background-color:#fff; font-family:times new roman, new york, times, serif;font-size:12pt"><div><span>which gromacs version are you using? cMAP is implemented in v4.5 or later<br></span></div><div><span>Jianguo<br></span></div><div><br></div><div style="font-family: times new roman, new york, times, serif; font-size: 12pt;"><div style="font-family: times new roman, new york, times, serif; font-size: 12pt;"><font face="Arial" size="2"><hr size="1"><b><span style="font-weight:bold;">From:</span></b> César Ávila <clavila@gmail.com><br><b><span style="font-weight: bold;">To:</span></b> Discussion list for GROMACS users <gmx-users@gromacs.org><br><b><span style="font-weight: bold;">Sent:</span></b> Sunday, 9 October 2011 12:07 AM<br><b><span style="font-weight: bold;">Subject:</span></b> [gmx-users] CMAP for alanine dipeptide in Charmm27 ff<br></font><br><div id="yiv1410838054">I would like to run REMD
simulations on the alanine dipeptide using the Charmm27ff + CMAP. Still, after processing the pdb with pdb2gmx, I do not see any entrance referring to the cmap term in the topology file. Does this mean that Cmap won't be calculated? <br>
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