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<div style="direction: ltr;font-family: Tahoma;color: #000000;font-size: 10pt;">I was recently told in passing that it would be possible to construct a 'potential energy landscape' from the simulations I have performed. This way I could remove any loading
rate differences between simulations and experimental force experiments I've been performing ... however I cannot find anywhere in which this is mentioned.<br>
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The only thing close I could find that was close was the free energy landscape using g_anaeig under the Dihedral PCA (<a href="http://www.gromacs.org/Documentation/How-tos/Dihedral_PCA?highlight=dihedral+pca" target="_blank">http://www.gromacs.org/Documentation/How-tos/Dihedral_PCA?highlight=dihedral+pca</a>)
however, I'm not sure this is what I'm looking for. <br>
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Does anyone know where I would be able to find out / read more about how to create potential energy landscapes from my simulation outputs?
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Thanks<br>
Natalie<br>
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