<p>Hey :)</p>
<p>The reference plays no role in centering. But I guess that Nilesh expects centering of the solute w.r.t. to the solvent, or is looking at the wrong center (tric/rect).</p>
<p>Cheers,</p>
<p>Tsjerk</p>
<p><blockquote type="cite">On Oct 17, 2011 7:06 PM, "Justin A. Lemkul" <<a href="mailto:jalemkul@vt.edu">jalemkul@vt.edu</a>> wrote:<br><br><p><font color="#500050">
Nilesh Dhumal wrote:
>
> Thanks Justin,
>
> Still solute is not at center.
>
</font></p>
Is your reference frame (i.e. the .tpr file) centered? If not, centering likely won't work as desired. I assumed that it was centered, per normal system building procedures.<br><font color="#888888">
<br>
-Justin</font><p><font color="#500050">
> Nilesh
>
>
> On Mon, October 17, 2011 11:27 am, Justin A. Lemkul wrote:
>
>> Nilesh Dhumal wrote...</font></p></blockquote></p>