<html><body><div style="color:#000; background-color:#fff; font-family:times new roman, new york, times, serif;font-size:12pt"><div>Dear Gromacs user . Thanks for your previous eply<br></div><div> I am using plumed gromacs . i would like to find out Hydrophobic interaction free energies . As stated in manual.i used COORD keyword which is based on the Switching function . But When i use the COORD option i need to properly Guess the Term MM,NN, R_0 D_0 . For that i had been advised to look at the pair distribution function of the two groups (among Which i want to calculate Hydrophobic energies, plumed 1-2-2 manual) Is ther is any way to calculate pair Distribution function through gromacs. .between two
set of groups .<br></div><div> Thanks in Advance<br></div><div> <br></div><div> <br></div><br></div></body></html>