<p>Vijaya,</p>
<p>Can you explain how you think that may help solve the problem? I think it won't.</p>
<p>Tsjerk</p>
<p><blockquote type="cite">On Oct 28, 2011 7:40 AM, "vijaya subramanian" <<a href="mailto:vijaya65@hotmail.com">vijaya65@hotmail.com</a>> wrote:<br><br>
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-pbc atom<br><br><div><hr>Date: Fri, 28 Oct 2011 06:34:28 +0200<br>Subject: Re: [gmx-users] trjconv and -pbc<br>From: <a href="mailto:tsjerkw@gmail.com" target="_blank">tsjerkw@gmail.com</a><br>To: <a href="mailto:gmx-users@gromacs.org" target="_blank">gmx-users@gromacs.org</a><p>
<font color="#500050">
Hi Lina,
Try a _translational_ fit on the protein, follwed by a pass with -pbc nojump
Hope it help...</font></p><p><font color="#500050">-- gmx-users mailing list <a href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a> <a href="http://lists.gromacs.org/mailman/listinfo/gmx-users">http://lists.gromacs.org/mailman/listinfo/gmx-users</a> ...</font></p>
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