Dear Gromacs Users!<br><br><br>I'd like to know about external software wich could be used for structure processing for the futher simulation in Gromacs. Today I've tried one of the most popular such software Amber tools but I've forced with problems during compilation of it ") So I'm looking for possible analogues )<br>
<br>First of all I'm intresting in software for the addition different CAPing groups to N and C termi of my protein.<br><br>Is there any plugins for Pymol or VMD for such purposes? I've loked for this option in both of that software but couldnot find<br>
<br><br>Thank you for your help,<br><br>James<br>