Yes, the phosphate ion moves around the protein but I am not able to find out how many of them bind to my protein. How can that be done ??<br><br><div class="gmail_quote">On Thu, Dec 1, 2011 at 8:39 PM, Justin A. Lemkul <span dir="ltr"><<a href="mailto:jalemkul@vt.edu">jalemkul@vt.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;"><div class="HOEnZb"><div class="h5"><br>
<br>
bharat gupta wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi,<br>
<br>
Hi,<br>
<br>
I have done a simulation of 10ns with my proteins and 0.5 M phosphate ion. Now I want to know where does the phosphate ion bind on the protein surface or distribution of phosphate ions on protein surface ?? .. can help me finding out this ....<br>
<br>
</blockquote>
<br></div></div>
Have you watched the trajectory to see what happens?<br>
<br>
-Justin<br>
<br>
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Justin A. Lemkul<br>
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Virginia Tech<br>
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jalemkul[at]<a href="http://vt.edu" target="_blank">vt.edu</a> | (540) 231-9080<br>
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</font></span></blockquote></div><br><br clear="all"><div><br></div>-- <br>Bharat<br>Ph.D. Candidate<br>Room No. : 7202A, 2nd Floor<br>Biomolecular Engineering Laboratory<br>Division of Chemical Engineering and Polymer Science<br>
Pusan National University<br>Busan -609735<br>South Korea<br>Lab phone no. - +82-51-510-3680, +82-51-583-8343<div>Mobile no. - 010-5818-3680<br>E-mail : <a href="mailto:monu46010@yahoo.com" target="_blank">monu46010@yahoo.com</a></div>
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