<table cellspacing="0" cellpadding="0" border="0" ><tr><td valign="top" style="font: inherit;">The name of ion is different when using different force field You can check which field force you use and find out how Na and Cl ion is written in this force field.<BR><BR>Yeping Sun<BR>CAS Key Laboratory of Pathogenic Microbiology & Immunology<BR>INSTITUTE OF MICROBIOLOGY CHINESE ACADEMY OF SCIENCES <BR>NO.1 Beichen West Road,Chaoyang District,Beijing 100101,china<BR><BR>--- <B>11年12月11日，周日, Setare Jiji <I><jj.64fhony@yahoo.com></I></B> 写道：<BR>
<BLOCKQUOTE style="PADDING-LEFT: 5px; MARGIN-LEFT: 5px; BORDER-LEFT: rgb(16,16,255) 2px solid"><BR>发件人: Setare Jiji <jj.64fhony@yahoo.com><BR>主题: [gmx-users] No such moleculetype Na<BR>收件人: gmx-users@gromacs.org<BR>日期: 2011年12月11日,周日,下午5:17<BR><BR>
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<TD id=yiv617815497drftMsgContent style="FONT-SIZE: 10pt; FONT-FAMILY: arial">Hi,<BR>Thanks for your responding.<BR><BR>I checked my ions.itp file in which file sodium and chlorine ions are as Na and Cl form.<BR><BR>Thus, I used genion as follows:<BR><BR>genion -s ions.tpr -o 1AKI_solv_ions.gro -p topol.top -nname Cl -nn 8 -pname Na<BR><BR>Unfortunately, I encountered same fatal error.<BR><BR>any help will highly appreciated.<BR><BR></TD></TR></TBODY></TABLE></DIV></TD></TR></TBODY></TABLE></DIV><BR>-----下面为附件内容-----<BR><BR>
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