<font color='black' size='2' face='arial'>thanks<br>
<br>
<div style="clear:both">Ramya Parthasarathi<br>
ramya.sarati@aol.com<br>
</div>
<br>
<br>
<div style="font-family:arial,helvetica;font-size:10pt;color:black">-----Original Message-----<br>
From: Dallas Warren <Dallas.Warren@monash.edu><br>
To: Discussion list for GROMACS users <gmx-users@gromacs.org><br>
Sent: Tue, Dec 20, 2011 11:53 am<br>
Subject: RE: [gmx-users] pressure profiles<br>
<br>
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<div class="MsoNormal"><span style="font-size:11.0pt;font-family:">It will be saved in the .edr file. Use g_energy to extract the data you are interested in.</span></div>
<div class="MsoNormal"><span style="font-size:11.0pt;font-family:"> </span></div>
<div class="MsoNormal"><span style="font-size:10.0pt;font-family:">Catch ya,<br>
<br>
Dr. Dallas Warren</span></div>
<div class="MsoNormal"><span style="font-size:10.0pt;font-family:">Medicinal Chemistry and Drug Action</span></div>
<div class="MsoNormal"><span style="font-size:10.0pt;font-family:">Monash Institute of Pharmaceutical Sciences</span><span style="font-size:10.0pt;font-family:">, Monash University<br>
381 Royal Parade, Parkville VIC 3010<br>
<a href="mailto:dallas.warren@monash.edu">dallas.warren@monash.edu</a></span></div>
<div class="MsoNormal"><span style="font-size:10.0pt;font-family:">+61 3 9903 9304<br>
---------------------------------<br>
When the only tool you own is a hammer, every problem begins to resemble a nail.</span><span style="font-size:11.0pt;font-family:">
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<div class="MsoNormal"><b><span style="font-size:10.0pt;font-family:">From:</span></b><span style="font-size:10.0pt;font-family:"> <a href="mailto:gmx-users-bounces@gromacs.org">gmx-users-bounces@gromacs.org</a> [<a href="mailto:gmx-users-bounces@gromacs.org?">mailto:gmx-users-bounces@gromacs.org</a>]
<b>On Behalf Of </b>Ramya Parthasarathi<br>
<b>Sent:</b> Wednesday, 21 December 2011 9:06 AM<br>
<b>To:</b> <a href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a><br>
<b>Subject:</b> [gmx-users] pressure profiles</span></div>
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<div class="MsoNormal"> </div>
<div class="MsoNormal"><span style="font-size:10.0pt;font-family:">Hi,
</span></div>
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<div class="MsoNormal"><span style="font-size:10.0pt;font-family:"> </span></div>
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<div class="MsoNormal" style="margin-bottom:12.0pt"><span style="font-size:10.0pt;font-family:">I am simulating DOPC lipid molecules in water, i would like to plot the pressure profiles, for the systems i have . Can someone tell
me , is there any option in GROMACS which can give the pressure profile?</span></div>
<div>
<div class="MsoNormal"><span style="font-size:10.0pt;font-family:">Ramya Parthasarathi<br>
<a href="mailto:ramya.sarati@aol.com">ramya.sarati@aol.com</a></span></div>
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<pre style="font-size: 9pt;"><tt>--
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