Thanks for your reply. I want to whether does it make any sense or is it possible to simulate fragments of proteins and find their folding rate and then correlate it to folding rate of whole protein ??<br><br><div class="gmail_quote">
On Sat, Dec 31, 2011 at 8:00 AM, Justin A. Lemkul <span dir="ltr"><<a href="mailto:jalemkul@vt.edu">jalemkul@vt.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div class="im"><br>
<br>
bharat gupta wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi,<br>
<br>
I want to know whether it's possible to calculate the folding rate of 20 residue peptide folding into a beta-hairpin using gromacs ??<br>
<br>
</blockquote>
<br></div>
Anything is possible ;) But seriously, there is existing literature on such topics, I suspect you can find methodology that will suit your needs.<br>
<br>
-Justin<br>
<br>
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Justin A. Lemkul<br>
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Virginia Tech<br>
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</font></span></blockquote></div><br><br clear="all"><br>-- <br>Bharat<br>Ph.D. Candidate<br>Room No. : 7202A, 2nd Floor<br>Biomolecular Engineering Laboratory<br>Division of Chemical Engineering and Polymer Science<br>Pusan National University<br>
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