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    On 11/01/2012 10:07 PM, Anik Sen wrote:
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      <div style="direction: ltr; font-family: Tahoma; color: rgb(0, 0,
        0); font-size: 10pt;">I have already done that but the problem
        persisits.<br>
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    <br>
    Get a clean tarball of FFTW3 and follow
    <a class="moz-txt-link-freetext" href="http://www.gromacs.org/Downloads/Installation_Instructions#Details_for_building_the_FFTW_prerequisite">http://www.gromacs.org/Downloads/Installation_Instructions#Details_for_building_the_FFTW_prerequisite</a>.
    Probably you have a mess of previous configure commands, or didn't
    actually install the --enable-shared binaries.<br>
    <br>
    Mark<br>
    <br>
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          <div style="direction: ltr;" id="divRpF880567"><font
              color="#000000" face="Tahoma" size="2"><b>From:</b>
              <a class="moz-txt-link-abbreviated" href="mailto:gmx-users-bounces@gromacs.org">gmx-users-bounces@gromacs.org</a>
              [<a class="moz-txt-link-abbreviated" href="mailto:gmx-users-bounces@gromacs.org">gmx-users-bounces@gromacs.org</a>] on behalf of Javier Cerezo
              [<a class="moz-txt-link-abbreviated" href="mailto:jcb1@um.es">jcb1@um.es</a>]<br>
              <b>Sent:</b> Wednesday, January 11, 2012 1:56 PM<br>
              <b>To:</b> <a class="moz-txt-link-abbreviated" href="mailto:gmx-users@gromacs.org">gmx-users@gromacs.org</a><br>
              <b>Subject:</b> Re: [gmx-users] (no subject)<br>
            </font><br>
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          <div>Hi<br>
            <br>
            You should compile your fftw with --enable-shared if you
            want to link your gromacs installation to shared libraries
            (which is the default in the latest versions). Check the
            installation instructions in the website.<br>
            <br>
            Javier<br>
            <br>
            El 11/01/12 08:20, Anik Sen escribi&oacute;:
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                <font size="3"><span style="font-family: Times New
                    Roman;">Im having problems installing Gromacs. I
                    followed the GROMACS installation instructions as
                    suggested by justin</span></font>. But in vain. The
                same error is coming again and again. Please suggest.<br>
                <br>
                The error file is given below:<br style="font-family:
                  Times New Roman;">
                <font size="4"><br>
                  <br style="font-family: Times New Roman;">
                </font>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>/usr/bin/ld:
                        /usr/local/lib/libfftw3.a(<wbr>plan-dft-r2c-3d.o):
                        relocation R_X86_64_32 against `a local symbol'
                        can not be used when making a shared object;
                        recompile with -fPIC</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>/usr/local/lib/libfftw3.a:
                        could not read symbols: Bad value</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>collect2: ld returned
                        1 exit status</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>make[3]: *** [<a
                          moz-do-not-send="true"
                          href="http://libmd_d.la/" target="_blank">libmd_d.la</a>]
                        Error 1</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>make[3]: Leaving
                        directory `/home/ganguly/Gromacs/<wbr>gromacs-4.5.5/src/mdlib'</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>make[2]: ***
                        [all-recursive] Error 1</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>make[2]: Leaving
                        directory `/home/ganguly/Gromacs/<wbr>gromacs-4.5.5/src'</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>make[1]: *** [all]
                        Error 2</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>make[1]: Leaving
                        directory `/home/ganguly/Gromacs/<wbr>gromacs-4.5.5/src'</font></b></font></p>
                <p style="text-align: left; font-family: Times New
                  Roman;"><font size="4"><b><font>make: ***
                        [all-recursive] Error 1</font></b></font></p>
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                Thanx in advance<br>
                Anik<br>
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              <div style="font-size: 9pt; font-family:
                'Calibri',sans-serif;">========================================================<br>
                Anik Sen<br>
                Student<br>
                CSIR-Central Salt &amp; Marine Chemicals Research
                Institute,<br>
                Gijubhai Badheka Marg.<br>
                Bhavnagar, Gujarat 364002<br>
                <div><img moz-do-not-send="true" alt="www.csmcri.org"
                    src="http://www.csmcri.org/images/logo.png"></div>
                ========================================================</div>
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            <pre class="moz-signature" cols="72">-- 
Javier CEREZO BASTIDA
PhD Student
Physical Chemistry
Universidad de Murcia
Murcia (Spain)
Phone: (+34)868887434</pre>
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