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On 11/01/2012 6:15 PM, Dialing Pretty wrote:
<blockquote
cite="mid:1326266124.11615.YahooMailNeo@web121706.mail.ne1.yahoo.com"
type="cite">
<div style="color: rgb(0, 0, 0); background-color: rgb(255, 255,
255); font-family: times new roman,new york,times,serif;
font-size: 12pt;"><span style="right: auto;"><font size="1">
<div> </div>
<div><font size="3">Dear All,</font></div>
<div> </div>
<div><font size="3">I am trying to install GROMACS 455. I
got a series of error message in the "MAKE" step. Will
you please take a look at the following MAKE screen file
to see on how to make the installation successful?</font></div>
</font></span></div>
</blockquote>
<br>
You should provide the command lines you used when seeking help. As
it is, I can only presume you haven't correctly followed point 4 of
<a
href="http://www.gromacs.org/Downloads/Installation_Instructions/Cygwin_HOWTO">http://www.gromacs.org/Downloads/Installation_Instructions/Cygwin_HOWTO</a>
about disabling threads.<br>
<br>
Mark<br>
<br>
<blockquote
cite="mid:1326266124.11615.YahooMailNeo@web121706.mail.ne1.yahoo.com"
type="cite">
<div style="color:#000; background-color:#fff; font-family:times
new roman, new york, times, serif;font-size:12pt"><span
style="RIGHT: auto"><font size="1">
<div><font size="3"><var id="yui-ie-cursor"></var></font></div>
<div> </div>
<div><font size="3">Cheers,</font></div>
<div> </div>
<div><font size="3">Dialing</font></div>
<div> </div>
<div><font size="3">cc -DHAVE_CONFIG_H -I. -I../../../src
-I/usr/include/libxml2 -I../../../include -O3
-fomit-frame-pointer -finline-functions -Wall
-Wno-unused -msse2 -funroll-all-loops -std=gnu99
-fexcess-precision=fast -I./include -MT pthreads.lo -MD
-MP -MF .deps/pthreads.Tpo -c pthreads.c -DPIC -o
.libs/pthreads.o</font></div>
<div><font size="3">cc -DHAVE_CONFIG_H -I. -I../../../src
-I/usr/include/libxml2 -I../../../include -O3
-fomit-frame-pointer -finline-functions -Wall
-Wno-unused -msse2 -funroll-all-loops -std=gnu99
-fexcess-precision=fast -I./include -MT pthreads.lo -MD
-MP -MF .deps/pthreads.Tpo -c pthreads.c -o pthreads.o
>/dev/null 2>&1</font></div>
<div><font size="3">mv -f .deps/pthreads.Tpo
.deps/pthreads.Plo</font></div>
<div><font size="3">/bin/sh ../../../libtool --tag=CC
--mode=compile cc -DHAVE_CONFIG_H -I. -I../../../src
-I/usr/include/libxml2 -I../../../include -O3
-fomit-frame-pointer -finline-functions -Wall
-Wno-unused -msse2 -funroll-all-loops -std=gnu99
-fexcess-precision=fast -I./include -MT numa_malloc.lo
-MD -MP -MF .deps/numa_malloc.Tpo -c -o numa_malloc.lo
numa_malloc.c</font></div>
<div><font size="3">cc -DHAVE_CONFIG_H -I. -I../../../src
-I/usr/include/libxml2 -I../../../include -O3
-fomit-frame-pointer -finline-functions -Wall
-Wno-unused -msse2 -funroll-all-loops -std=gnu99
-fexcess-precision=fast -I./include -MT numa_malloc.lo
-MD -MP -MF .deps/numa_malloc.Tpo -c numa_malloc.c -DPIC
-o .libs/numa_malloc.o</font></div>
<div><font size="3">numa_malloc.c:117:73: error: expected
‘)’ before ‘Processor’</font></div>
<div><font size="3">numa_malloc.c:118:78: error: expected
‘)’ before ‘ProcNumber’</font></div>
<div><font size="3">numa_malloc.c:121:45: error: expected
‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before
‘smalloc_GetNumaProcessorNodeEx’</font></div>
<div><font size="3">numa_malloc.c:122:45: error: expected
‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before
‘smalloc_GetCurrentProcessorNumberEx’</font></div>
<div><font size="3">numa_malloc.c: In function
‘InitNumaHeapSupport’:</font></div>
<div><font size="3">numa_malloc.c:151:5: error:
‘smalloc_GetCurrentProcessorNumberEx’ undeclared (first
use in this function)</font></div>
<div><font size="3">numa_malloc.c:151:5: note: each
undeclared identifier is reported only once for each
function it appears in</font></div>
<div><font size="3">numa_malloc.c:151:44: error:
‘func_GetCurrentProcessorNumberEx_t’ undeclared (first
use in this function)</font></div>
<div><font size="3">numa_malloc.c:151:79: error: expected
‘;’ before ‘GetProcAddress’</font></div>
<div><font size="3">numa_malloc.c:152:5: error:
‘smalloc_GetNumaProcessorNodeEx’ undeclared (first use
in this function)</font></div>
<div><font size="3">numa_malloc.c:152:39: error:
‘func_GetNumaProcessorNodeEx_t’ undeclared (first use in
this function)</font></div>
<div><font size="3">numa_malloc.c:152:69: error: expected
‘;’ before ‘GetProcAddress’</font></div>
<div><font size="3">numa_malloc.c: In function
‘ReturnHeapHandle’:</font></div>
<div><font size="3">numa_malloc.c:246:5: error:
‘PROCESSOR_NUMBER’ undeclared (first use in this
function)</font></div>
<div><font size="3">numa_malloc.c:246:22: error: expected
‘;’ before ‘CurrentProcessorNumber’</font></div>
<div><font size="3">numa_malloc.c:285:5: warning: implicit
declaration of function
‘smalloc_GetCurrentProcessorNumberEx’</font></div>
<div><font size="3">numa_malloc.c:285:42: error:
‘CurrentProcessorNumber’ undeclared (first use in this
function)</font></div>
<div><font size="3">numa_malloc.c:287:5: warning: implicit
declaration of function ‘smalloc_GetNumaProcessorNodeEx’</font></div>
<div><font size="3">numa_malloc.c:324:9: warning: implicit
declaration of function ‘HeapSetInformation’</font></div>
<div><font size="3">Makefile:332: recipe for target
`numa_malloc.lo' failed</font></div>
<div><font size="3">make[4]: *** [numa_malloc.lo] Error 1</font></div>
<div><font size="3">make[4]: Leaving directory
`/cygdrive/d/GROMACSNEW/GROMACS455/gromacs-4.5.5/src/gmxlib/thread_mpi'</font></div>
<div><font size="3">Makefile:599: recipe for target
`all-recursive' failed</font></div>
<div><font size="3">make[3]: *** [all-recursive] Error 1</font></div>
<div><font size="3">make[3]: Leaving directory
`/cygdrive/d/GROMACSNEW/GROMACS455/gromacs-4.5.5/src/gmxlib'</font></div>
<div><font size="3">Makefile:302: recipe for target
`all-recursive' failed</font></div>
<div><font size="3">make[2]: *** [all-recursive] Error 1</font></div>
<div><font size="3">make[2]: Leaving directory
`/cygdrive/d/GROMACSNEW/GROMACS455/gromacs-4.5.5/src'</font></div>
<div><font size="3">Makefile:238: recipe for target `all'
failed</font></div>
<div><font size="3">make[1]: *** [all] Error 2</font></div>
<div><font size="3">make[1]: Leaving directory
`/cygdrive/d/GROMACSNEW/GROMACS455/gromacs-4.5.5/src'</font></div>
<div><font size="3">Makefile:347: recipe for target
`all-recursive' failed</font></div>
<div><font size="3">make: *** [all-recursive] Error 1</font></div>
</font>
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serif; FONT-SIZE: 12pt"> </div>
</span></div>
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