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Hi<br>
<br>
You should compile your fftw with --enable-shared if you want to
link your gromacs installation to shared libraries (which is the
default in the latest versions). Check the installation instructions
in the website.<br>
<br>
Javier<br>
<br>
El 11/01/12 08:20, Anik Sen escribió:
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<div style="direction:ltr; font-family:Tahoma; color:#000000;
font-size:10pt"><font size="3"><span style="font-family:Times
New Roman">Im having problems installing Gromacs. I followed
the GROMACS installation instructions as suggested by justin</span></font>.
But in vain. The same error is coming again and again. Please
suggest.<br>
<br>
The error file is given below:<br style="font-family:Times New
Roman">
<font size="4"><br>
<br style="font-family:Times New Roman">
</font>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>/usr/bin/ld: /usr/local/lib/libfftw3.a(<wbr>plan-dft-r2c-3d.o):
relocation R_X86_64_32 against `a local symbol' can not
be used when making a shared object; recompile with
-fPIC</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>/usr/local/lib/libfftw3.a: could not read
symbols: Bad value</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>collect2: ld returned 1 exit status</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>make[3]: *** [<a moz-do-not-send="true"
href="http://libmd_d.la/" target="_blank">libmd_d.la</a>]
Error 1</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>make[3]: Leaving directory
`/home/ganguly/Gromacs/<wbr>gromacs-4.5.5/src/mdlib'</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>make[2]: *** [all-recursive] Error 1</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>make[2]: Leaving directory
`/home/ganguly/Gromacs/<wbr>gromacs-4.5.5/src'</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>make[1]: *** [all] Error 2</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>make[1]: Leaving directory
`/home/ganguly/Gromacs/<wbr>gromacs-4.5.5/src'</font></b></font></p>
<p style="text-align:left; font-family:Times New Roman"><font
size="4"><b><font>make: *** [all-recursive] Error 1</font></b></font></p>
<p style="text-align:left"><br>
</p>
<p style="text-align:left"><br>
</p>
Thanx in advance<br>
Anik<br>
</div>
<div style="font-size:9pt; font-family:'Calibri',sans-serif">========================================================<br>
Anik Sen<br>
Student<br>
CSIR-Central Salt & Marine Chemicals Research Institute,<br>
Gijubhai Badheka Marg.<br>
Bhavnagar, Gujarat 364002<br>
<div><img moz-do-not-send="true" alt="www.csmcri.org"
src="http://www.csmcri.org/images/logo.png"></div>
========================================================</div>
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<br>
<pre class="moz-signature" cols="72">--
Javier CEREZO BASTIDA
PhD Student
Physical Chemistry
Universidad de Murcia
Murcia (Spain)
Phone: (+34)868887434</pre>
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