<p>In bash you can also use 'here-strings':</p>
<p>trjconv ... <<< 0</p>
<p>Quite similar to using echo, though.</p>
<p>Cheers,</p>
<p>Tsjerk</p>
<p><blockquote type="cite">On Feb 3, 2012 3:17 PM, "lina" <<a href="mailto:lina.lastname@gmail.com">lina.lastname@gmail.com</a>> wrote:<br><br><p><font color="#500050">On Friday 03,February,2012 10:02 PM, francesca vitalini wrote:
>
> Sure!
> My code is
>
> #!/bin/bas...</font></p>
try touch a file as index.txt and put 0 in the index.txt<br>
<br>
trjconv -f ../xtc/300-${i}.xtc -s ../../dynamin_dimer_phfitted.<u></u>pdb -o ../cg_gro/300-${i}.gro -pbc < index.txt<p><font color="#500050">
> done
>
> very stupidly I just need to type 0 all the time in the interactive
> window that trjco...</font></p><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Thanks<br>
<br>
2012/2/3 lina <<a href="mailto:lina.lastname@gmail.com" target="_blank">lina.lastname@gmail.com</a> <mailto:<a href="mailto:lina.lastname@gmail.com" target="_blank">lina.lastname@gmail.<u></u>com</a>>><p><font color="#500050">
>
> On Friday 03,February,2012 09:56 PM, francesca vitalini wrote:
>
> Yes but those tips...</font></p>
<mailto:<a href="mailto:Mark.Abraham@anu.edu." target="_blank">Mark.Abraham@anu.edu.</a>_<u></u>_au <mailto:<a href="mailto:Mark.Abraham@anu.edu.au" target="_blank">Mark.Abraham@anu.edu.<u></u>au</a>>>><p>
<font color="#500050">
>
>
> On 4/02/2012 12:21 AM, francesca vitalini wrote:
>
> Hi!
> ...</font></p>
<a href="http://www.gromacs.org/____Documentation/How-tos/Using_____Commands_in_Scripts" target="_blank">http://www.gromacs.org/____<u></u>Documentation/How-tos/Using___<u></u>__Commands_in_Scripts</a><br>
<<a href="http://www.gromacs.org/__Documentation/How-tos/Using___Commands_in_Scripts" target="_blank">http://www.gromacs.org/__<u></u>Documentation/How-tos/Using___<u></u>Commands_in_Scripts</a>><p><font color="#500050">
>
> <<a href="http://www.gromacs.org/__Documentation/How-tos/Using___Commands_in_Scripts">http://www.gromacs.org/__Documentation/How-tos/Using___Commands_in_Scripts</a>
> <ht...</font></p>
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