Justin,<br><br>Firstly I've created the box of desired size with only 500 molecules ( I need 1000)<br><br>Than I've tried to add extra 200 molecules by means of Genbox<br><br>genbox -cp super_box.gro -ci Ccl4.gro -nmol 200 -o new_solv.gro<br>
<br>but no molecules have been added<br>Added 0 molecules (out of 200 requested) of Cl4<br><br>also I've tried<br><br>genbox -cp super_box.gro -cp Ccl4.gro -nmol 200 -o new_solv.gro<br><br>but system were crashed with message<br>
<br>Reading solute configuration<br>God Rules Over Mankind, Animals, Cosmos and Such<br>Containing 2500 atoms in 500 residues<br>Initialising van der waals distances...<br><br>WARNING: masses and atomic (Van der Waals) radii will be determined<br>
based on residue and atom names. These numbers can deviate<br> from the correct mass and radius of the atom type.<br><br>Reading solvent configuration<br>"God Rules Over Mankind, Animals, Cosmos and Such"<br>
solvent configuration contains 5 atoms in 1 residues<br><br><br>Is there any ways to add extra mollecules to the pre defined box ?<br><br>James<br>