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    On 28/02/2012 3:50 PM, priya thiyagarajan wrote:

    <blockquote

cite="mid:CAEuVTxB=Uq7uixYoM6Xf8g-pUGjQK7_4r-o0aiG_nk+gVgBZRw@mail.gmail.com"

      type="cite"><font><span

          style="font-family:arial,helvetica,sans-serif">hello sir,</span><br

          style="font-family:arial,helvetica,sans-serif">

        <br style="font-family:arial,helvetica,sans-serif">

        <span style="font-family:arial,helvetica,sans-serif">while

          performing simulation for 30ns, because of queue time limit my

          run terminated at 11.6ns.. then i extended my simulation using

          mdrun as you suggest..</span><br

          style="font-family:arial,helvetica,sans-serif">

        <br style="font-family:arial,helvetica,sans-serif">

        <span style="font-family:arial,helvetica,sans-serif">while doing

          so i got error as</span><br

          style="font-family:arial,helvetica,sans-serif">

        <br style="font-family:arial,helvetica,sans-serif">

        <span style="font-family:arial,helvetica,sans-serif">Fatal

          error:</span><br

          style="font-family:arial,helvetica,sans-serif">

        <span style="font-family:arial,helvetica,sans-serif">Failed to

          lock: md20.log. Function not implemented.</span><br

          style="font-family:arial,helvetica,sans-serif">

        <span style="font-family:arial,helvetica,sans-serif">For more

          information and tips for troubleshooting, please check the

          GROMACS</span><br

          style="font-family:arial,helvetica,sans-serif">

        <span style="font-family:arial,helvetica,sans-serif">website at

          <a moz-do-not-send="true"

            href="http://www.gromacs.org/Documentation/Errors">http://www.gromacs.org/Documentation/Errors</a></span><br

          style="font-family:arial,helvetica,sans-serif">

        <br style="font-family:arial,helvetica,sans-serif">

        <br style="font-family:arial,helvetica,sans-serif">

        <span style="font-family:arial,helvetica,sans-serif">when i

          searched in mailing list i got one solution to this as</span><br

          style="font-family:arial,helvetica,sans-serif">

      </font><font style="font-family:arial,helvetica,sans-serif"

        size="2"><br>

      </font>

      <pre><font style="font-family:arial,helvetica,sans-serif" size="2">as a workaround you could run with -noappend and later

concatenate the output files. Then you should have no

problems with locking<span style="font-family:arial,helvetica,sans-serif">.

</span>

</font><font style="font-family:arial,helvetica,sans-serif" size="2">

<font size="4"><font style="font-family: times new roman,serif;" size="2">now when i tried using -noappend my simulation is working,.

is it correct?? 

</font></font></pre>

    </blockquote>

    <br>

    Maybe. We can't know.<br>

    <br>

    <blockquote

cite="mid:CAEuVTxB=Uq7uixYoM6Xf8g-pUGjQK7_4r-o0aiG_nk+gVgBZRw@mail.gmail.com"

      type="cite">

      <pre><font size="4"><font style="font-family:times new roman,serif" size="2">

Also because my simulation is terminated because of queue limit i didnt get my gro file..

did i get my gro file at the end of simulation without any error?</font></font>

</pre>

    </blockquote>

    <font size="4"><br>

      I don't understand what you are asking. See </font><a

      href="http://www.gromacs.org/Documentation/How-tos/Extending_Simulation">http://www.gromacs.org/Documentation/How-tos/Extending_Simulation</a>

    for general discussion of this topic.<br>

    <br>

    Mark<br>

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