Hi Patrick,<br><br>You can extract the diagonal from the covariance matrix generated with g_covar (-ascii). That is equal to the RMSF per atom-coordinate.<br><br>Cheers,<br><br>Tsjerk<br><br><div class="gmail_quote">On Wed, Mar 28, 2012 at 10:32 PM, patrick wintrode <span dir="ltr"><<a href="mailto:pat_wde2@yahoo.com">pat_wde2@yahoo.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0pt 0pt 0pt 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><table border="0" cellpadding="0" cellspacing="0"><tbody><tr><td style="font:inherit" valign="top">Does some one know of a way to get g_rms or g_rmsf to write out the x, y, and z components of the rms(f) for each atom/residue separately?<br>
<br>Thanks.<br><br>Patrick L. Wintrode<br>Department of Pharmaceutical Sciences<br>University of Maryland<br></td></tr></tbody></table><br>--<br>
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<br>post-doctoral researcher<br>Molecular Dynamics Group<br>* Groningen Institute for Biomolecular Research and Biotechnology<br>* Zernike Institute for Advanced Materials<br>University of Groningen<br>The Netherlands<br>