<html><body><div style="color:#000; background-color:#fff; font-family:times new roman, new york, times, serif;font-size:12pt"><div>Dear All,</div><div> </div><div>I just run a pdb2gmx of a protein, the error message is "<font size="1"></div><div><font size="3">Fatal error:</font></div><div><font size="3">
</font></div><div><font size="3">Atom CG is used in an interaction of type atom in the topology</font></div><div><font size="3">
</font></div><div><font size="3">database, but an atom of that name was not found in residue</font></div><div><font size="3">
</font></div><div></font><font size="3">number 5."</font></div><div> </div><div>According to the sugestion I have tried to find the reason in "</div><div><a href="http://www.gromacs.org/Documentation/Errors">http://www.gromacs.org/Documentation/Errors</a>"</div><div> </div><div>But in that part of Document no this error was explained.</div><div> </div><div>I am looking forward to getting an explaination from you.</div><div> </div><div>Cheers,</div><div> </div><div>Acoot</div></div></body></html>