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On 5/04/2012 2:07 PM, Acoot Brett wrote:
<blockquote
cite="mid:1333598863.55355.YahooMailNeo@web121804.mail.ne1.yahoo.com"
type="cite">
<div style="color:#000; background-color:#fff; font-family:times
new roman, new york, times, serif;font-size:12pt">
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Dear All,</div>
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<div>In <a moz-do-not-send="true"
href="http://www-personal.umich.edu/%7Eamadi/fwspidr_tutor.pdf">http://www-personal.umich.edu/~amadi/fwspidr_tutor.pdf</a>,
there is a command</div>
<div> </div>
<div><font face="TimesNewRoman"><strong>tpbconv -f </strong>traj.trr
</font><b><font face="TimesNewRoman,Bold">-s </font></b><font
face="TimesNewRoman">topol.tpr </font><b><font
face="TimesNewRoman,Bold">-e </font></b><font
face="TimesNewRoman">ener.edr </font><b><font
face="TimesNewRoman,Bold">-o </font></b><font
face="TimesNewRoman">tpxout.tpr </font><b><font
face="TimesNewRoman,Bold">–until </font></b><font
face="TimesNewRoman">$VALUE</font></div>
<div> </div>
<div>But we know we never have the topol.tpr as I know.</div>
<div> </div>
<div>Will you please give a clarification?</div>
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</blockquote>
<br>
Have you followed the commands up to that point? If so, you will
likely have observed grompp write such a file, which is the default
filename for grompp -o, as you can see with grompp -h.<br>
<br>
Mark<br>
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