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it seesm to be good. <br>
just one pieces of advices, why not use CHARMM36 for this tutorial ?
since it is the best FF for lipids currently.<br>
<br>
On 04/26/2012 11:14 AM, Anirban Ghosh wrote:
<blockquote
cite="mid:CAJqxE7cNdw4n9L9CG8cQt_zeKoOj-4qxrBTcZX1NgGypbXqY8g@mail.gmail.com"
type="cite"><span style="">Hi ALL,</span><br style="">
<div class="gmail_quote" style="">
<div style="color:rgb(34,34,34)"><br>
</div>
<div style="color:rgb(34,34,34)">I have prepared a step-wise
tutorial for running a MD simulation of a GPCR protein
inserted in a lipid bilayer. It can be found at the following
URL:</div>
<div style="color:rgb(34,34,34)"><br>
</div>
<div style="color:rgb(34,34,34)"><a moz-do-not-send="true"
href="https://sites.google.com/site/anirbanzz/gpcr-gromacs-tutorial"
target="_blank" style="color:rgb(17,85,204)">https://sites.google.com/site/anirbanzz/gpcr-gromacs-tutorial</a></div>
<div style="color:rgb(34,34,34)"><br>
</div>
<div class="im adL">
<div>I sincerely hope it will help people who are new to such
simulations and the GROMACS community in general. This
tutorial is adapted from the membrane protein tutorial
prepared by Justin Lemkul.</div>
<div><br>
</div>
<div><br>
</div>
<div>Regards,</div>
<div><br>
</div>
<div>Anirban</div>
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